Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00806 atgctatgtagtttttgtgtgaagagaaaagattgtgacacagttgagagacgagtttattgctctgccgcagctcaatcaccaccaccagcttggccaggaacagctattccggagcctgaagattttaagatatgggatggcccaaaacctattactgtcttaggatctactggttcaattggaactcagacactgagcatagtggctgagtttccagaaagatttaaagttgtgagtcttgcggctggctctaacattactcttcttgctgaccagataaaaacatttaagccacaagttgttggtcttagaaatgaggctttacttgatgaactcaaagaggctttggctgatgtggaacacaaacctgaaatcatccctggagagcaaggagtcattgaggctgctcgtcacccagattcagccactgtagttacaggaattgttggttgtgcaggactaaagccaacagttgctgcaattgaagcaggaaaagacatagcattggccaacaaagagacaatgattgctggtgccccttttgttcttcctcttgctcacaaacataacataaaaattcttcctgcagattcagaacattctgcaattttccagtccatccaagggttgccaaagggtgcacttaggaaaatccttttaactggatcaggaggtgcttttagagaatggcctgctgaaaagatgaaagacattaaacttgctgatgcattgaagcatcccatatggagtttggggagaaaaataactattgactctgctacccttttcaacaagggtctagaagtaattgaagcacattatttgtttggagcagactatgatgacattgagattgttattcatccacaatctattatacattccttggttgaaacacaggattcatctgttattgcacagttggggataccagacatgcggttgccactcctttatacattatcttggccagaaagaatctattgctctgaaataacttggccacgccttgatcttagcaagtatggttctctaacattttatgcacctgatgacaagaaatttccatctgtgaatctttgctacgctgctggacgtgctggaggcaccatgacaggagttcttagtgcagcaaatgagaaagctgtggaaatgtttgttgaagaaaagattagttatctggatatattcaaggttgtggaactaacatgccaagaacatcaaaaagaactagtagcatctccctcacttgaggaaattattcactatgaccagtgggcaagacaatatgctgctagtctgcaaaaagcttcaagtgtttga 1326 0.0 MLCSFCVKRKDCDTVERRVYCSAAAQSPPPAWPGTAIPEPEDFKIWDGPKPITVLGSTGSIGTQTLSIVAEFPERFKVVSLAAGSNITLLADQIKTFKPQVVGLRNEALLDELKEALADVEHKPEIIPGEQGVIEAARHPDSATVVTGIVGCAGLKPTVAAIEAGKDIALANKETMIAGAPFVLPLAHKHNIKILPADSEHSAIFQSIQGLPKGALRKILLTGSGGAFREWPAEKMKDIKLADALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGADYDDIEIVIHPQSIIHSLVETQDSSVIAQLGIPDMRLPLLYTLSWPERIYCSEITWPRLDLSKYGSLTFYAPDDKKFPSVNLCYAAGRAGGTMTGVLSAANEKAVEMFVEEKISYLDIFKVVELTCQEHQKELVASPSLEEIIHYDQWARQYAASLQKASSV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00806 441 Gene3D - 44 198 - -
Pste6g00806 441 PIRSF Dxp_reductoisomrs 49 441 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pste6g00806 441 Gene3D - 354 439 - -
Pste6g00806 441 FunFam 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic 44 198 - -
Pste6g00806 441 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 174 312 - -
Pste6g00806 441 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 52 435 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pste6g00806 441 FunFam 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic 354 438 - -
Pste6g00806 441 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 198 IPR036291 -
Pste6g00806 441 Pfam DXP reductoisomerase C-terminal domain 309 430 IPR026877 -
Pste6g00806 441 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 4 439 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pste6g00806 441 NCBIfam 1-deoxy-D-xylulose-5-phosphate reductoisomerase 50 432 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pste6g00806 441 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 342 435 IPR036169 -
Pste6g00806 441 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 52 179 IPR013512 GO:0070402
Pste6g00806 441 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 194 277 IPR013644 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00806 Pste-Chr6 3094319 3102181 Dispersed