Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00804 GGAGGAGGGAGGAGAGTTGACAGTTGACAGTGGACAGCTGAACCAGAAGACTCTGTCTCTCCCTCCGCCGCAACTCTCTCTCTGTCACACACTTGTTTTGTCATCATGTTTTCCTCCAATGCATGCTCCTTTACGTGCAAGTCTTGGTGCAGCAACTTGTGTGGTTCACAGAGGAAGCCTTTGAGAGTCACGTGTTGTAATCCAGGCAATACCAAAAGTCAGGGCGGCGTTGTGATGGACAAAGCCGGCAGCGACGTGAACCCAATTGCAGGCGGCGGCGTTATGGATGTGTACGGCGAGGACAGGGCCACGGAGGATCAGTTGGTGACTCCCTGGAGTATCTCTGTTGCCAGTGGTTACACTTTGCTGAGAGATCCACACTACAACAAAGGACTCTCCTTCACTGAAGAAGAGAGGGACGCTCACTACTTGCGCGGCCTTCTTCCCCCAACTGTTATTTCTCAAGAAACTCAGGTGACCAAAATGATCAATCATATACGCGGTTATCAAGTTCCTTTGCACAAGTACATGGCAATGATGGATCTTCAGGAGAGAAATGAAAGGCTGTTTTACAAGCTTCTACTTGATCATGTTGAGGAGTTACTACCAGTTGTCTATACTCCAACCGTTGGTGAAGCTTGCCAGAAATATGGGAGTATCTTCATGCGTCCTCAAGGTCTTTATATAAGTTTGAAGGAGAAAGGGAGGATTCTTGAAGTACTAAAGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAGCGAATTCTGGGTCTTGGGGATCTTGGCTGTCAGGGAATGGGAATACCAGTAGGAAAACTTTCTTTATATACAGCACTTGGCGGAGTTCGTCCTTCTTCTTGCTTGCCTATTACCATCGATGTGGGTACAAACAATGAAAACTTGTTGAATGATGAACTATATATAGGGCTCAAGCATAAACGAGTAACTGGGCAGGAATATGCTGAACTTCTGCATGAATTCATGAATGCAGTCAAGCAAAATTACGGTGAAAAAATCCTTGTTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACTCATCTTGTCTTTAACGATGATATTCAGGGAACAGCATCAGTGGTCCTTGCAGGACTAGTTGCAGCTCTGAAATCGGTTGGGGGAAACTTGACTGATCATAGGTTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGAATAGCAGAACTCATAGCACTTGAAACATCGAAACGGACAAATGTCCCACTGGATGAAGTGCGCAAGAACATTTGGTTAGTGGACTCAAAGGGTTTGATTGTGAGTTCCCGAAAAGAATCACTTCAACATTTTAAGAAGCCATGGGCTCATGAACATGAACCTGTTAAGGAACTTGTAGATGCTATTAATCAAATTAAGCCAACGGTGTTAATTGGAACATCAGGACAAGGGAGAACTTTTACTAAGGAAGTCATTGAAGCTATGGCTTCCATTAATGAGAAACCTATTATTCTTGCTCTTTCCAACCCAACATCACAGTCAGAATGCACTGCTGAAGATGCTTATACTTGGAGCCAGGGGCGTGCCATTTTTGCTAGTGGGAGCCCATTTGCCCCAGTTGAATATGATGGGAAAGTGTTTATGCCCGGCCAGGCTAATAATGCATACATATTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGGACCATTCGAGTGCATGATGACCTGCTTCTGGCAGCTTCTGAGGCTTTGGCTTCACAGCTGACCCAGCAGGACTATGACAAGGGGCTCATATACCCACCTTTCAGCAACATCAGAAAGATTTCTGCACAGATAGCTGCCAACGTGGCTGCTAAGTCCTATGAACTTGGCTTGGCCACCCGCCTTCCTCAACCAAAAGATTTGGTGAAGTTAGCAGAGAGCTCTATGTATACACCAATCTATAGAGGTTACCGATGA 1977 0.4507 MFSSNACSFTCKSWCSNLCGSQRKPLRVTCCNPGNTKSQGGVVMDKAGSDVNPIAGGGVMDVYGEDRATEDQLVTPWSISVASGYTLLRDPHYNKGLSFTEEERDAHYLRGLLPPTVISQETQVTKMINHIRGYQVPLHKYMAMMDLQERNERLFYKLLLDHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGRILEVLKNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNENLLNDELYIGLKHKRVTGQEYAELLHEFMNAVKQNYGEKILVQFEDFANHNAFDLLERYRSTHLVFNDDIQGTASVVLAGLVAALKSVGGNLTDHRFLFLGAGEAGTGIAELIALETSKRTNVPLDEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKELVDAINQIKPTVLIGTSGQGRTFTKEVIEAMASINEKPIILALSNPTSQSECTAEDAYTWSQGRAIFASGSPFAPVEYDGKVFMPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALASQLTQQDYDKGLIYPPFSNIRKISAQIAANVAAKSYELGLATRLPQPKDLVKLAESSMYTPIYRGYR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00804 623 PANTHER MALIC ENZYME-RELATED 57 620 - -
Pste6g00804 623 Gene3D - 337 623 - -
Pste6g00804 623 PRINTS Malic enzyme signature 214 243 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 PRINTS Malic enzyme signature 154 178 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 PRINTS Malic enzyme signature 310 328 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 PRINTS Malic enzyme signature 335 351 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 PRINTS Malic enzyme signature 250 272 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 PRINTS Malic enzyme signature 366 382 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 PRINTS Malic enzyme signature 469 485 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 ProSitePatterns Malic enzymes signature. 335 351 IPR015884 GO:0004471
Pste6g00804 623 FunFam Malic enzyme 337 623 - -
Pste6g00804 623 SMART Malic_M_2 339 592 IPR012302 GO:0051287
Pste6g00804 623 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 339 622 IPR036291 -
Pste6g00804 623 PIRSF ME 57 623 IPR001891 GO:0004470|GO:0004471
Pste6g00804 623 FunFam Malic enzyme 82 336 - -
Pste6g00804 623 CDD NAD_bind_1_malic_enz 339 617 - -
Pste6g00804 623 Pfam Malic enzyme, N-terminal domain 148 329 IPR012301 GO:0004471
Pste6g00804 623 SMART malic_2 148 329 IPR012301 GO:0004471
Pste6g00804 623 Pfam Malic enzyme, NAD binding domain 339 590 IPR012302 GO:0051287
Pste6g00804 623 Gene3D - 82 336 IPR037062 GO:0004471
Pste6g00804 623 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 59 338 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00804 Pste-Chr6 3090607 3095432 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00804 6 3090607 3095432 Pste6g00804 6 3090607 3095432 ECH
Pste6g00804 6 3090607 3095432 Pste3g03608 3 28388192 28394039 ECH
Pste3g00478 3 2745436 2750270 Pste6g00804 6 3090607 3095432 ECH
Pste2g02276 2 22921205 22925768 Pste6g00804 6 3090607 3095432 ECH
Pste6g00804 6 3090607 3095432 Pste2g02276 2 22921205 22925768 ECH
Pste6g00804 6 3090607 3095432 Pste4g02823 4 19849757 19851548 ECH
Pste6g00804 6 3090607 3095432 Pste6g01976 6 9161724 9163741 ECH
Pste6g00804 6 3090607 3095432 Pste5g01289 5 8295081 8297038 ECH
Pste3g03608 3 28388192 28394039 Pste6g00804 6 3090607 3095432 PCT