Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00791 GTCAACAGTGAAGCACACACAAAAAACCTTGGAATGAAGTAGAAGAGACAAGTTGTGCTCTGCATTCACTTCCATTTTCACCTGAGCTGATGGAGCACGCCAAAAAGATGGATAAATTAGATTTCACTTCGCTACCATTCCCCAAGCTCTCTTCAGAGGAGATGCTGGAATTGGAAAGAATATACAAAGATATGGGAGAAAAACAGCTTGACCAGAAGTTCTGCCAGGAGATTGCTAAAAGTGTTAGTTTCTCATCTAATGGTGCTAGTAAAACTTCCTTATCATGGCAACAGGTGCAACAGTGGTTCAAAAATAGACAGAGTGTGTCACAGGGTATAGATAGCTCATCATCTGACCTGCTGAAACTATCTGCTGATCTTTTAGATTCATCTTATTTAGTAAACGGAGATAGAAGCTCTTCAGGTTCAAAAGGTAAACAAGGTGCAGTTCTTAAAGAGTTGCAATTTGAGGCAAGATCTACAAAAGACGTTGCATGGCATGATGTTTCAATGTTCCTTAACTACAGAGTTCTGAGCACAGGCGAACTTGAAGTCCGTGTCCGATACGCTGGATTTGGGAAAGAGCAGGATGAGTGGATGAATGTGAAATTGGGGGTGCGGGAGAGATCTGTCCCATTAGTACCTTCAGAGTGTCACAAGGTCAAGGATGACGATCTTGTACTGTGTTTCCTGGAAAGAGAAGATTATGCCCTCTATTGTGATGCTCGAATTATAAAAATCCAGAGGAAGATACATGATCCAACAGAGTGTACTTGCACCTTCATTGTTCGATTTCTCCATGACAATACTGAGGAAGGTGTTTCTTGGAACAGGTTATGCTGTAGGCCTAAGCAAGATGAATGTGTGGTTTACCCAAATCTTGCCCTCGATTTCACCTTAAACCCCTCCCTAGATATCACCCTAAACCCCATTGAGTCATTGTGGGGATAGAAAGAGCCAACTTTTTTCGTATTTTTCTCTCTTACTTTTAGTTGTTGTCTATTGTTTGTTACTACTAGATCACGGAGTTTGGAAAGTCTTCATTTTTTTGTCTTTTTTTATTTTAATGTTATAAATATTAATTAAAATACCAAAAAAATTGAATTAATTAAGTATTGT 1118 0.3927 MEHAKKMDKLDFTSLPFPKLSSEEMLELERIYKDMGEKQLDQKFCQEIAKSVSFSSNGASKTSLSWQQVQQWFKNRQSVSQGIDSSSSDLLKLSADLLDSSYLVNGDRSSSGSKGKQGAVLKELQFEARSTKDVAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSVPLVPSECHKVKDDDLVLCFLEREDYALYCDARIIKIQRKIHDPTECTCTFIVRFLHDNTEEGVSWNRLCCRPKQDECVVYPNLALDFTLNPSLDITLNPIESLWG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00791 286 Pfam SAWADEE domain 123 250 IPR032001 GO:0003682
Pste6g00791 286 Gene3D - 122 182 - -
Pste6g00791 286 Gene3D - 183 255 - -
Pste6g00791 286 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 19 257 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00791 Pste-Chr6 3034329 3042589 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste6g00791 SAWADEE 1e-36 CL0049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00791 6 3034329 3042589 Pste6g00791 6 3034329 3042589 ECH