Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00789 CTGTGTCGAAGCAAGTACTCAAAATCCTTCTCCCCCTCTCTCTCACATATTCGTCCATGGCTTCTTCTTCTCTGCGTGATCGTTTCCTAACCCTAATTCGGCTGCGACGATCTCTCCGCGTTTAGATTCAAGTAATCTACATAGTGTGGATCGCTTCCAGAACCCTTCACATTTTGTTTTTTCGTGTTCCTCTTTAGTTTTTGTTGTTTGGCGAAATCGGTTCGGTTCGGTTCCCTTCCCAGGACTTGTTCAAGTTTTTTTGTGGATTCTGCGCCTTGTGCTCTGATCGCTGTTCTTGAGAGAGGCGCGCTAGTTTCTGAAATTTCGTTTTTATCTCCTTAGTCGAAATTTGCGCGTGGAGGATGAGATTTGGAGAATGAGCCATGCCTATACCTCGTAGTGGAAAACGCAGGGGTCGGTCAGCAGCGAAACAACAGCAGCAGGGACAGGGACAAGTGGTAGAAGGGGAGGCCATTGCGAACAGGACGCGAAGGCGTCGTGCGGCGGCGGCAGCAGCGGCACTGCCCGAAAATAATAATAACAACAACAACAAGCAGCAACTGCAACAGCCACAGGAGCAGGTGGTGGCAGTAAATGAGAACGTAGTTGCTGCTGGGAAGGAAGAAGAAGAGAAAAATCGGGTATTGGAGGAAGGTGCTGGCGTTGGTGTGGGTGCCGCTGAGAGAGAAGTGGTTGCTGAGAAAGATATGGATGGGAATAACAGCGGAGGTCGGAGCAATGATAAGGCCAATGCCGGTGACGATGACCCCAATACCCCTCAGGTTCCACAGAAGGATAATCTAGAAATTGTTGTCTTTGAAAATGCGCGATTTCGTTTGGTCGATACTGCACAGACTCTAATGCTTTTTAGAATTCAAGTGGGTAATTCCCCTTGGTACAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAAGTATATGTTGGTAGACGTTCTGGTGGAAACATGAATGAGAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAACTGGAGCATAGAACTAGTAAAGGATGTACCTATGGGCCACCCTATGAGTGGCAGGTTTACAACACTCTTGGTGGCAGTCACGGTGTGCCTCAGGTACACTACAAGGGCAGGCAGGGTGACTATTACGTCATGGTAATGGACATGCTGGGACCTAGCCTTTGGGATGTTTGGAATAATAACTCTCACACCATGTCAACTGAAATGGTAGCTTGTATCGCCATAGAAGCTATATCCATATTGGAAAAAATGCACTCTCGAGGGTATTTGCATGGAGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACACCTGATGAGAAAAAGTTGTTCCTTGTGGACCTTGGATTGGCTACTAAGTGGAGGGATAGTACAGCAGGTTCACATGTAGAATATGACCAGAGGCCAGATGTTTTCAGGGGCACGGTCCGCTATGCTAGTGTGCATGCACATGTAGGGAGAACCGCAAGCAGGAGAGATGACTTAGAATCTCTTGCATATACGCTGATTTTTCTTCTAAAAGGCCGCCTTCCTTGGCAGGGGTTTCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGGAACATCTCCGGACAACCTATGTTCCTTTTGTCCCCTTCCTTTTAAGCAGTTCGTTGAACATGTTGTGAACCTAAAGTTTGACGAAGAGCCTAACTACGCAAAATACATTTCTCTATTTGATGGTATTGTTGGTCCTAACCCTGATATTAGACCAATTAATACTGAAGGTGCACAGAAGCTCGTTGGTCACAAGAGAGGTCGGGTTGCAATTGAAGAAGAGGATGATGAGCAACCTAAAAAGAAGATTCGCATTGGTTTGCCCGCATCGCAATGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATTCAAGGCTAGCCCAGCACATTGAGAAAGGAAATGAGGACGGCTTATATATTAGCAGTGTTGCTTCAAGTCAGAATCTGTGGGCATTAATCATGGATGCAGGGACAGGTTTCAATGCCCAAGTTTACGAACTCTCACCCTTCTTTCTCCATAAAGAATGGATCATGGAGCACTGGGAAAAGAATTATTATATCAGTGCAATTGCTGGAGCTGTAAATGGGAGCTCGCTAGTAGTAATGTCCAAGGGCACACAGTATTTGCAGCAATCTTACAAAGTTAGTGATTCATTTCCCTTCAAATGGATCAACAAAAAGTGGAGGGAGGGCTTTTACGTGACTGCTATGGCCACCGCAGGATCCAGATGGGGAGTAGTTATGTCACGTGGTGCGGGATTTTCAGATCAGGTGATTGAACTAGATTTTCTATATCCTAGCGAGGGAATTCACAAGCGGTGGGATAACGGATATCGAATCACAGCTACTGCTGCGACTTGGGACCAAGCTGCTTTTGTCCTGAGTGTGCCAAGGAGGAAGCCCCTGGATGAAACCCAGGAAACACTTAGGACGTCTGCTTTTCCCAGTTCACATGTCAAGGAGAAGTGGGCGAAGAACCTCTACATTGCTTCTATTTGCTACGGACGAACAGTTTCTTGACCCTGCAAACTTTGCTGCTGAATATTTCAAGTGGCATGATGGTCCAGCCTCCCAGAAATTTTGATGACAAAAGTTTTAATTATTTGTATGTAGCAAAATGAATATGTCTTCCATGAAACTTGAAAACGTCAAGTTGCCATTCGTGTGCAAATCGTTTCTATGTCAATGATTAATTAAGGTTATGCAGACGCGCGAGGCTCTTTGTTTTTATATCACTTCATCAAGGGTCAGTATATAGTCACACCCTAATTTCATTTAAATAAGGATCAGTGACCACCTCTTATCCC 2878 0.4517 MPIPRSGKRRGRSAAKQQQQGQGQVVEGEAIANRTRRRRAAAAAAALPENNNNNNNKQQLQQPQEQVVAVNENVVAAGKEEEEKNRVLEEGAGVGVGAAEREVVAEKDMDGNNSGGRSNDKANAGDDDPNTPQVPQKDNLEIVVFENARFRLVDTAQTLMLFRIQVGNSPWYKVERKLGKGGFGQVYVGRRSGGNMNERTGPGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYLHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTAGSHVEYDQRPDVFRGTVRYASVHAHVGRTASRRDDLESLAYTLIFLLKGRLPWQGFQGENKGFLVCKKKMGTSPDNLCSFCPLPFKQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLVGHKRGRVAIEEEDDEQPKKKIRIGLPASQWISVYNARRPMKQRYHYNVSDSRLAQHIEKGNEDGLYISSVASSQNLWALIMDAGTGFNAQVYELSPFFLHKEWIMEHWEKNYYISAIAGAVNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWGVVMSRGAGFSDQVIELDFLYPSEGIHKRWDNGYRITATAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSSHVKEKWAKNLYIASICYGRTVS 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00789 735 PANTHER CASEIN KINASE-RELATED 170 703 - -
Pste6g00789 735 ProSiteProfiles Protein kinase domain profile. 172 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00789 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Pste6g00789 735 ProSitePatterns Protein kinases ATP-binding region signature. 178 210 IPR017441 GO:0005524
Pste6g00789 735 MobiDBLite consensus disorder prediction 98 138 - -
Pste6g00789 735 Gene3D Transferase(Phosphotransferase) domain 1 158 491 - -
Pste6g00789 735 SUPERFAMILY Protein kinase-like (PK-like) 172 451 IPR011009 -
Pste6g00789 735 MobiDBLite consensus disorder prediction 115 137 - -
Pste6g00789 735 FunFam casein kinase 1-like protein HD16 149 491 - -
Pste6g00789 735 MobiDBLite consensus disorder prediction 1 65 - -
Pste6g00789 735 CDD STKc_CK1 172 447 - -
Pste6g00789 735 MobiDBLite consensus disorder prediction 47 65 - -
Pste6g00789 735 SMART serkin_6 172 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00789 735 Pfam Protein kinase domain 172 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00789 Pste-Chr6 3021988 3027737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00789 172 396 AGC Kinase Gene Family AT3G08730 23.348 4.34e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pste6g00789 Pkinase 4.4e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00789 6 3021988 3027737 Pste6g00789 6 3021988 3027737 ECH