Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00782 TTGAATTTGAATGGAGGGTCATCATCTCCATCACCACCAACAAAGGATTCAGCTTCAGAATATGAGTGTGAACGTGGATGCTACTGATAGGTTTCCTCAATGGAGCATCCAAGAGACAAAGGAGTTTCTCGTGATTCGTGCAGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAATTGTGGGAAGTGATATCCAATCGAATGAAGGAAAAGGGTTACCATAGAAGCGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATTTGAAACAATGGAGCAAGAAGCGACGAGGCAGCAATTCCCATTTTACAATGAATTCAATGCGATTTTCACTGCAAGGATGCAGAGAATGCTGTGGGCTGAGGCTGAGGGAGGATCAAAGAAGAACAAGGCTGCACCAGTTTCATCAGATGAAGAAGAAGAAGGCAATGAAGAGAGTGAAGCTGGTAACAGAAGAAAGAAGAAAAAGGCAAAGATAGTAGGAGGGGAAGGTGGTAGTGGAAGTGGAAGTTTGAGTAGTTTAAAGGAGATTTTGGAGGAGTTCATGAGGCAACAAATGCAAATAGAGGCTCAATGGATGGAAGCATTTGAGGCAAGGGAGAATGAGAGGAGGTTGAAGGAAATGGAGTGGAGACAAGCCATGGAAGTGTTGGAGAATGAGAGGATAATGATGGAAGAAAGATGGAGAGAAAGGGAGGAACAAAGGAGGATAAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCTTTAATCACAGCTTTGCTAAACAAGCTAGAGAGGCATGGAATGTAGTGAAGAAGCTAAGATTTTGTTCAACCAAACAAAACATTGATGAGACTAGCTAGTGTTTGATTGTTGACAAGAAAATACATGTAGTAGTGGGCTCCAAGAAAAAGGCAAGAAATGTAGTTTAGTAGTTAGCATAGCCAAGTGGCCAACTTTAATGTGTTTCCTCTTCTTCTCATGAAAGGAAGCTTGATTATAGAGGTTTGTTCTTAGAAACTCAATTTCTTAGAAATATTTAACTTTACTGTATACTTCATATGATTTTGTCAACTTGTCCTCCTTTCTGCTTCTCCTCTCTTGTTTTGCCCACTTGAGGCTTTTCTAATTTACCCAATACAAAGAAATAA 1155 0.4121 MEGHHLHHHQQRIQLQNMSVNVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKAAPVSSDEEEEGNEESEAGNRRKKKKAKIVGGEGGSGSGSLSSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERHGM 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00782 267 CDD GT1 29 92 - -
Pste6g00782 267 ProSiteProfiles Myb-like domain profile. 31 87 IPR001005 -
Pste6g00782 267 MobiDBLite consensus disorder prediction 127 176 - -
Pste6g00782 267 Coils Coil 176 196 - -
Pste6g00782 267 PANTHER FI21293P1 17 263 - -
Pste6g00782 267 Pfam Myb/SANT-like DNA-binding domain 30 114 IPR044822 -
Pste6g00782 267 Gene3D - 31 92 - -
Pste6g00782 267 FunFam Zinc finger and SCAN domain-containing 20 31 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00782 Pste-Chr6 2989464 2991159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00782 4 266 Trihelix Transcription Factor Family AT2G38250 50.883 8.80e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste6g00782 Myb_DNA-bind_4 4.5e-19 CL0123