Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00766 TCAAAACGGTGCGCTTCATCCCTCTAAAACAATACCAAATTCTTTTTCTTCTTCTCTCTCACTTTCTCGCAATAAAACACTATCTATATGGAAGCGCCCAAATACTTCGTCGGAGGTTATTTTGGCGCTGGAGGACCTGAACAATTCTCGTCACCGGAGAAGCGCCTCGTTGACCCGAAAACCGAGCCTTTTGCCATTGATGACCTCCTTGACTTCTCACATGCCGACGCCATTATGTCTGACAGTTTCTTCGACAATGTCGCCGGAAACTCCGCCGACTCCTCCACCGTCACCGCCATTCACAGCTGCAACTCCTCAATTTCCGGCAGCGACAACCGCTACGCATCCGCCATTGTCCCTCGCGGCTTCTCCGGAGATCCTCAGTTCTCAGGAGAACTCTGCGTTCCGTATGACGACATGGCGGAACTGGAATGGCTCTCTAACTTTGTGGAAGACTCGTTCTCCGCCGAGGAAGAGCTGAAGACGCTGCAGCTACTCTCCGGAGCCACTGCGTCCACAGTCATTGGCGCAAAACCGCAGACTCCGGAGTCGTCCTCCTCCACCGACACGCTTCCACCGTTTGCCTCCGACGATACCGCGAGAAACGCACCGTTTCTCCACTCAGAAACGCCACTCCCGGGGAAGGCGCGCAGCAAGCGTTCACGCGCGGCGCCGGGAGACTGGTCCACGCGCCTGCTCCACCTGGTGGCGCCGCCGGAGCAAGAGAAGTCAATGCAGACAAAGGCGGCGGAGAAGAAGAGAGAGGGAGCGAATGCAGAGTGTTCTGGACGGAAATGCCTCCACTGCGGGGCGGAGAAGACGCCGCAGTGGCGAACGGGACCGATGGGACCGAAGACGCTGTGCAACGCCTGCGGAGTGAGGTTCAAGTCCGGTAGGCTTGTGCCGGAGTACCGGCCTGCGGCGAGTCCGACGTTCGTGTCGACGAAACATTCGAATTCGCATAGGAAGGTTTTGGAGCTGAGGCGGCAGAAGGAGCTGCAGCGACAGCAGCATCAGCAACTGATGAGTCAGACTTCAATTTTCGGCGTATCCAACGGTGGAGATGAGTTCTTGATCCATCATCATCATCACCATCAGTGTGGGCCAGACTTTAGACACGTTATTTAGTTTAATTTTTATTTTAATTTAGGGTGCAGGTCTAAGTCTAAACTATCGTCAGCTTCAGCACTCCTTTTTTTCTTTTTTTCTCATCTGGAAAATTTTGTCGTATAAATTTGAATTCTTA 1246 0.5353 MEAPKYFVGGYFGAGGPEQFSSPEKRLVDPKTEPFAIDDLLDFSHADAIMSDSFFDNVAGNSADSSTVTAIHSCNSSISGSDNRYASAIVPRGFSGDPQFSGELCVPYDDMAELEWLSNFVEDSFSAEEELKTLQLLSGATASTVIGAKPQTPESSSSTDTLPPFASDDTARNAPFLHSETPLPGKARSKRSRAAPGDWSTRLLHLVAPPEQEKSMQTKAAEKKREGANAECSGRKCLHCGAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQKELQRQQHQQLMSQTSIFGVSNGGDEFLIHHHHHHQCGPDFRHVI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00766 346 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 234 294 - -
Pste6g00766 346 Coils Coil 295 315 - -
Pste6g00766 346 CDD ZnF_GATA 236 283 IPR000679 GO:0006355|GO:0043565
Pste6g00766 346 Pfam GATA zinc finger 237 270 IPR000679 GO:0006355|GO:0043565
Pste6g00766 346 ProSiteProfiles GATA-type zinc finger domain profile. 231 267 IPR000679 GO:0006355|GO:0043565
Pste6g00766 346 MobiDBLite consensus disorder prediction 145 166 - -
Pste6g00766 346 PIRSF Txn_fac_GATA_plant 18 323 IPR016679 GO:0003677|GO:0005634|GO:0045893
Pste6g00766 346 ProSitePatterns GATA-type zinc finger domain. 237 262 IPR000679 GO:0006355|GO:0043565
Pste6g00766 346 Gene3D - 228 312 IPR013088 GO:0006355|GO:0008270
Pste6g00766 346 FunFam GATA transcription factor 226 312 - -
Pste6g00766 346 SMART GATA_3 231 281 IPR000679 GO:0006355|GO:0043565
Pste6g00766 346 MobiDBLite consensus disorder prediction 145 201 - -
Pste6g00766 346 PANTHER GATA TRANSCRIPTION FACTOR 33 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00766 Pste-Chr6 2937152 2938535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00766 22 346 C2C2-Gata Transcription Factor Family AT4G32890 46.131 1.50e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pste6g00766 GATA 4.6e-15 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00766 6 2937152 2938535 Pste6g00766 6 2937152 2938535 ECH