Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00762 ACAACATCAACATCAAGGACCGTATCTTTAACTCCTATAACAACATGAACTGAAAAAAAAACAAAAGCTAGTTATTTCCCTCGAGAAGTAATCATCGTCATCAATAGGTATTATTTTTGCTGACGTGGAACTCATCTCATCACCTTCCATTCTTCTTTCTTCCTTCAACAGTAACAACACCATACCATTATTACTACTATCTCCTGAGTTTTAGCATTCGCATAGCTCTTTCTCTCTGAACCCTAATTTCCATTCTCTTTCCAACAATGACAATCCACTCTTCTACCGATCCAGATGGTTCTTTCAAAAGTGCGATGCCTTCATATTTTTATTTACCACCACTAGATGTTTCTACAGCATTTCCACAAGCAACTCCAGCATCAATGTTTCCTCCTTGCACTTCAGATTATTTTCAACTGGACGACTTATTGACATTGGAGGAACATGCCCTTAGGAAGAAAGTAAGAGAGTGTATGGAAAAAGAAATTGCTCCAATAATGACCGAGGCAATATTGGGAGAAGGCCAAGTTCCCATTTCATGTTATTCCAAAGCTTGCTGCATTGCAAATTGCTGGTGGAACGATCAAGCTAGCTCTGATTATCAGGATTATGGTTGCCCTGGTCTTTCTATAACTGGAAGTGCTCTAGCTATCGCAGAAGTTTCAAGAGTTGATGCAAGCTGTTCAACTTTCATTTTGGTCCATTCATCCTTGGCAATGCTTACTATTGCATTGTGTGGATCAGAAGCTCAGAAGCTAAAGTACCTTCCTTCTTTGGCACAATTGAAAACTATAGCATGTTGGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAAGACCACTGCTACAAAGGTGGAGGGAGGTTGGATACTGGAGGGCCAAAAGCGGTGGATAGGAAACAGTACATTTGCTGATGTATTGGTTGTGTTTGCTAGGAATGCAACTACAAATCAGATAAATGGATTTATTATTAAAAAGGATGCACCTGGTTTAACAGTCACAAAAATAGAGAATAAAATTGGACTTAGAATTGTACAAAATGGAGACATTGTTATGAGAAAAGTTTTTGTTCCTGATGAGGACAGAATCTCAGGAGTAAATTCTTTTCAGGACACAAACAAGGTACTTGCTGTATCACGTGTAATGGTTGCTTGGATGCCCATTGGTATATCAATGGGAATCTATGATATGTGTCATAGGTACCTAAAGGAGAGGAAACAATTTGGAGCACCATTAGCAGCTTTCCAAATCAGCCAACAGAAACTTGTCCAGATGCTCGGTAATATTCAAGCTATGACTCTAGTTGGTTGGCGCCTCTGCAAACTGTACGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGAAAGTCGTGGATAAGCTTGAGAGCAAGAGAAACAGCTGCTCTGGGACGCGAATTGCTAGGTGGCAATGGAATTTTGGCTGATTTTCTTGTGGCAAAGGCATTCTGTGATCTGGAACCCATTTATACCTATGAAGGCACATATGACATTAACACCTTGGTTACTGGTAGAGAAGTTACTGGTTTTGCCAGTTTTAAGCCGGTTGCTCAAAGAAGTAGACTGTAAAAGTGTTATAATACATGTTTCCTTGCAGTTTTCATTAGGTAACTTTTATGTATGTCATTTATCTGTGACTTTGTTTGAGAAATTGTAAGATTTTATGTTTTGAAAGAATTTTTAAATTATAAAATTTTAACCA 1734 0.3899 MTIHSSTDPDGSFKSAMPSYFYLPPLDVSTAFPQATPASMFPPCTSDYFQLDDLLTLEEHALRKKVRECMEKEIAPIMTEAILGEGQVPISCYSKACCIANCWWNDQASSDYQDYGCPGLSITGSALAIAEVSRVDASCSTFILVHSSLAMLTIALCGSEAQKLKYLPSLAQLKTIACWALTEPDYGSDASALKTTATKVEGGWILEGQKRWIGNSTFADVLVVFARNATTNQINGFIIKKDAPGLTVTKIENKIGLRIVQNGDIVMRKVFVPDEDRISGVNSFQDTNKVLAVSRVMVAWMPIGISMGIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMTLVGWRLCKLYESGKMTPGHASLGKSWISLRARETAALGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGFASFKPVAQRSRL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00762 444 Gene3D - 36 176 IPR037069 GO:0016627|GO:0050660
Pste6g00762 444 PANTHER ACYL-COENZYME A OXIDASE 12 442 IPR045008 GO:0003995|GO:0006635
Pste6g00762 444 Pfam Acyl-CoA dehydrogenase, C-terminal domain 288 428 IPR009075 GO:0016627
Pste6g00762 444 Gene3D - 177 283 IPR046373 GO:0016627
Pste6g00762 444 Pfam Acyl-CoA dehydrogenase, middle domain 178 270 IPR006091 GO:0016627
Pste6g00762 444 Gene3D - 284 443 - -
Pste6g00762 444 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 388 407 IPR006089 GO:0003995
Pste6g00762 444 FunFam Acyl-coenzyme A oxidase 4, peroxisomal 284 443 - -
Pste6g00762 444 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 287 432 IPR036250 GO:0016627
Pste6g00762 444 FunFam Acyl-coenzyme A oxidase 4 peroxisomal 177 283 - -
Pste6g00762 444 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 46 282 IPR009100 GO:0016627
Pste6g00762 444 Pfam Acyl-CoA dehydrogenase, N-terminal domain 58 172 IPR013786 GO:0016627|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00762 Pste-Chr6 2905162 2911373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00762 1 444 Acyl Lipid Metabolism Gene Families AT3G51840 76.126 0.0 697