Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00759 ATGAGTAGAAGAAGGAGAAGGATGACAGAAGAGAAAGAAAGAAGAAGACATTCAGAGGGGAAGAGAAGGGTGTACCACGGCGTGAGGAAGCGCAACTGGGGGAAATGGGTGTCGGAAATACGCGAGCCTCGCAAGAAGTCCCGCATCTGGCTGGGAACCTTCGACACCCCCGAAATGGCGGCTCGTGCCCACGACGTGGCGGCTCTCTCCATCAAGGGCCACTCAGCAATTCTCAACTTTCCCCATATTGCACACCTGCTCCCACGACCCCTCACCTGCTCCCCCCGTGACATCCAAGCCGCCGCCACTGCCGCCGCTGCTATGGTTAAATTTGATCCCTCCTCTTATTCTGATTCCGATTCCGATTCCGATTCCGAACTCAGCCAGATAGTTGAACTTCCCAACATTGAAGACCACAGCAGCATTGACTCTGAGTTGCTGCTCCTTGACCCTTGGCTGAGGTCTTCTGAGTTCTCAATTAGATGTATGATCTTAGTCCCAAAGAGGGGGGTGGGGGTGACTTGTCTCTCCAACACGTAA 540 0.537 MSRRRRRMTEEKERRRHSEGKRRVYHGVRKRNWGKWVSEIREPRKKSRIWLGTFDTPEMAARAHDVAALSIKGHSAILNFPHIAHLLPRPLTCSPRDIQAAATAAAAMVKFDPSSYSDSDSDSDSELSQIVELPNIEDHSSIDSELLLLDPWLRSSEFSIRCMILVPKRGVGVTCLSNT 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00759 179 MobiDBLite consensus disorder prediction 1 21 - -
Pste6g00759 179 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Pste6g00759 179 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Pste6g00759 179 CDD AP2 25 82 IPR001471 GO:0003700|GO:0006355
Pste6g00759 179 MobiDBLite consensus disorder prediction 1 18 - -
Pste6g00759 179 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Pste6g00759 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 141 - -
Pste6g00759 179 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Pste6g00759 179 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Pste6g00759 179 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Pste6g00759 179 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Pste6g00759 179 Pfam AP2 domain 24 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00759 Pste-Chr6 2896659 2897446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00759 3 157 AP2-EREBP Transcription Factor Family AT5G11590 47.090 5.44e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste6g00759 AP2 1e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00759 6 2896659 2897446 Pste6g00759 6 2896659 2897446 ECH