Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00730 ATGATGGCTGGGAACCCTAACTGCTGGAGTATGCATCCACCATCTTTGATCCCTCCCCAGTATGTGCTTGGATCTTCTTCAATTCCTTTTAATTCTTCCACACAAAATCAAGAGCCCCCTCAGTCATTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAAGAGAGAGTTGCATTCAGTCATTTTCAATCAAAAAAGTTGGATGAGTGGAATGAACATATGCTTAATCAATCCTCCATAGTTCCTATGGTTGATGTAATAAAGCAAGAGGTTTCCCAGAGTGGTCACTTATATCACCATGGGCATGATCAGGAATTTCAGGTTTCTGGGGCACCTTGGTCGCATATGGTGCCAGTTTCTTCTTCCCCTAGGTCTAGTGTCGCTAGTTTCAGTAGTAATAATTTATTGGATTTCACATATAACAAGACAGATCATAGGAAGAACCAGCTACTAGATCACACATCCGAGTGTAACAGCATAGCCACTGGTGGAGCCTATAAGAAGACTAAGAGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGCGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTGAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAACCAAAGGACTTGAAGAGTAGAGGGCTGTGCTTGGTTCCTGTGTCTTGCACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCCGCATATGGAAGTGGATTTTAA 954 0.4361 MMAGNPNCWSMHPPSLIPPQYVLGSSSIPFNSSTQNQEPPQSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNQSSIVPMVDVIKQEVSQSGHLYHHGHDQEFQVSGAPWSHMVPVSSSPRSSVASFSSNNLLDFTYNKTDHRKNQLLDHTSECNSIATGGAYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPKDLKSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00730 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Pste6g00730 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 233 IPR036638 GO:0046983
Pste6g00730 317 MobiDBLite consensus disorder prediction 236 284 - -
Pste6g00730 317 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Pste6g00730 317 FunFam Transcription factor bHLH123 family 182 245 - -
Pste6g00730 317 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 299 - -
Pste6g00730 317 Gene3D - 182 238 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00730 Pste-Chr6 2769935 2772563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00730 136 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 61.654 2.85e-41 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00730 6 2769935 2772563 Pste6g00730 6 2769935 2772563 ECH