Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00715 ATGGAGCATCTCACATCACTTCTTATAATGTGTTTGTTTTGGCTGTATCTTTGTAACCATGTCTTTGTGGTTTCTGGTCAATGTCTTGATGATCAGAAGTCTTTGCTACTCCAATTTAAGAACAACCTCTCATTCACAGACAAGAAAGATAGAAGTTTCAACAAGCTGGATTCATGGAATGCAAGTAATGATTGTTGCAAACACTGGGAAGGAGTAAGATGTGACAAGAAGGGACATGTTACATATCTTTACCTTGCTGCAAAATCAATCTCAGTTGGATTTGACAATGTAAGTGTTGTTTTCAGTCTTGGACACCTTCAAATCCTAGATTTGTCAAATAATTACTTAACAGGCCCAATGACATCACTTGTCATGGTAAAAAATCTTACCTGTTTAAACCTTTCTAATAATAATTTAAATGGTACAATTTCATCATCTCATTTTGAAGGGTTGCACAATCTTGACATTATAGACTTGAGTTATAATTCTTTCACTGGAATTATCCCTTCTTCCCTTTTTACACTCCCATCACTACGAGTGATTTCACTTTCAGAAAATTCGTTTACTCAATGGGATGAAATTGTAAATTTGACATCCTTTAAACTAGAGATCCTTGATATAAGCATCAATAATCTGTCGGGGAGAATTCCTTCATACCTTTTTACACTCCCATTGCTGCTAGGAATTGAACTTTCCTACAATCAGTTTAGTCAACTAGATGAATTCATAAATGTGTCTTCTTCTAAATTAGATACCCTCGATTTAGAAGGCAATAAGTTGATAGGGCCTTTTCCAAAATTTATCTTCAAGCTCTGTGCACTCTCTACCCTTAAACTTTCTTCAAACAGGTTCAATGGCTTGGTGCAGCTGAACAAGTTTTTTGAGCTTAAAAATTTAACTGAACTAGACCTTTCGTACAACAACTTATCTGTCAATGTGAATGGTATAACTTTTGACCCATCTTCCATTCCCAGCATTAGCCTTCTATACTTGGCTTCCTGCAACTTGAAAACATTCCCTGATTTCTTGAGAAACCTGTCCAAAATACGCGATCTAGATCTTTCACATAACCAGATTCAAGGGATAATACCCAACTGGATTTGGCAATTTGACTATCTTCTTTTTCTTAATATTTCTCACAATTTGTTAACTAAATTTCAAGGACCTTTGCAAAATCTTGCTTCCAACATTCGTTACCTTGACTTTCATCACAATAAACTTCAAGGGCCAATACCTGTTTTTGATAACTCCTTATATTTGGATTTTTCAAGCAATAAGTTCAGTACTTCTATTCCACAAGATATTGGTAACTACTTGTCTCAGACATATTTTCTCTCTCTTTCAAATAATACTTTACATGGCAATATCCCTGATTCCCTCTGCGATGCTTCACTTCTACAAGTACTAGATCTTTCAATTAACAAGATTTCTGGCATAATTCCCTCGTGTTTGATGATGGTGAGTTGCATTGAAGTATTAAATATGAAAAACAACAATCTCTCGGGCTCTATTCCTGATACAATTCCAACTTCCTGTCGTTTGTGGTCTTTAAATCTTCATGGAAATGTATTAGATGGGTTAGTTCCAAAGTCTCTTGCATATTGCTCGAAGTTAAAGGTATTGGACCTTGGATCAAATCAAATCACTGGTGGCTTTCCATGCTTTTTGAACCAAATATCCACCCTTCGTATCCTTGTTTTGAGAAATAACAAGTTTGTAGGAACTCTAAGATGTCCTGAAGCTAATAAGACTTGGGAAATGCTTCAAATTGTGGATATTGCTTTCAACAATTTTAGCGGCTTCCAGAAAAATATTTCACAACTTGGACAAGAAACAAGCAAAGGTCAACAAATGGAGTTGGTTAAAATTTTGAAAATTTTCACATCCATTGATTTCTCGTCAAACCATTTTGAAGGACCTATACCTAAAGAGTTAATGGAATACAAAGCACTCCATGTCTTAAATTTGTCAAACAATGCTTTATCAGGTGAAATCCCATCATCTATAAGTAACTTGAGAGAATTGGAGTCTATGGACCTTTCACAAAACAATCTAAGTGGAGAAATTCCTGTGCAACTTGCAACTTTATCATTCTTATCATATTTAAATCTCTCCTACAATCGTTTAGTAGGAAAGATTCCAACGGGTACCCAACTTCAATCATTTCCAGCTTCTTCATTTGAAGGCAATGATGGGTTATTCGGTCCTCCACTGACAGAAAAACATGATGATAAAGAGCCAATGATGCTATCAAAATCAAAAAGTGAAAGGGTAGCTCTCACAACTAATTGGAATTTCATTAGTGTTGAGTTGGGATTGGTTTTTGGCCATGCAATTCTTTTTGGTTCACTCTTCATTTGGAAGCAATGGAGGGTATGGTATTGGCAACTTATTCATAAGATTCTTTGCTGGATCTTCCCTCAGTTGTATCTTGAATATGTAACCCAAAGAGGACAAACGTATGTGACTTTAAGGTGGCACCATTGA 2487 0.3567 MEHLTSLLIMCLFWLYLCNHVFVVSGQCLDDQKSLLLQFKNNLSFTDKKDRSFNKLDSWNASNDCCKHWEGVRCDKKGHVTYLYLAAKSISVGFDNVSVVFSLGHLQILDLSNNYLTGPMTSLVMVKNLTCLNLSNNNLNGTISSSHFEGLHNLDIIDLSYNSFTGIIPSSLFTLPSLRVISLSENSFTQWDEIVNLTSFKLEILDISINNLSGRIPSYLFTLPLLLGIELSYNQFSQLDEFINVSSSKLDTLDLEGNKLIGPFPKFIFKLCALSTLKLSSNRFNGLVQLNKFFELKNLTELDLSYNNLSVNVNGITFDPSSIPSISLLYLASCNLKTFPDFLRNLSKIRDLDLSHNQIQGIIPNWIWQFDYLLFLNISHNLLTKFQGPLQNLASNIRYLDFHHNKLQGPIPVFDNSLYLDFSSNKFSTSIPQDIGNYLSQTYFLSLSNNTLHGNIPDSLCDASLLQVLDLSINKISGIIPSCLMMVSCIEVLNMKNNNLSGSIPDTIPTSCRLWSLNLHGNVLDGLVPKSLAYCSKLKVLDLGSNQITGGFPCFLNQISTLRILVLRNNKFVGTLRCPEANKTWEMLQIVDIAFNNFSGFQKNISQLGQETSKGQQMELVKILKIFTSIDFSSNHFEGPIPKELMEYKALHVLNLSNNALSGEIPSSISNLRELESMDLSQNNLSGEIPVQLATLSFLSYLNLSYNRLVGKIPTGTQLQSFPASSFEGNDGLFGPPLTEKHDDKEPMMLSKSKSERVALTTNWNFISVELGLVFGHAILFGSLFIWKQWRVWYWQLIHKILCWIFPQLYLEYVTQRGQTYVTLRWHH 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00715 828 PRINTS Leucine-rich repeat signature 296 309 - -
Pste6g00715 828 PRINTS Leucine-rich repeat signature 106 119 - -
Pste6g00715 828 Pfam Leucine rich repeat 326 383 IPR001611 GO:0005515
Pste6g00715 828 Pfam Leucine rich repeat 650 709 IPR001611 GO:0005515
Pste6g00715 828 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Pste6g00715 828 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Pste6g00715 828 SUPERFAMILY L domain-like 28 310 - -
Pste6g00715 828 Pfam Leucine Rich repeat 534 550 IPR001611 GO:0005515
Pste6g00715 828 Pfam Leucine Rich repeat 297 310 IPR001611 GO:0005515
Pste6g00715 828 SUPERFAMILY L domain-like 417 728 - -
Pste6g00715 828 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 243 509 - -
Pste6g00715 828 Gene3D Ribonuclease Inhibitor 27 314 IPR032675 -
Pste6g00715 828 SMART LRR_typ_2 126 150 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 696 729 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 672 695 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 151 174 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 296 319 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 175 197 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 223 246 IPR003591 -
Pste6g00715 828 SMART LRR_typ_2 346 369 IPR003591 -
Pste6g00715 828 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 27 159 IPR046956 -
Pste6g00715 828 SUPERFAMILY L domain-like 320 436 - -
Pste6g00715 828 Gene3D Ribonuclease Inhibitor 315 417 IPR032675 -
Pste6g00715 828 Gene3D Ribonuclease Inhibitor 418 748 IPR032675 -
Pste6g00715 828 FunFam Tyrosine-sulfated glycopeptide receptor 1 510 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00715 Pste-Chr6 2714290 2716868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00715 6 780 Receptor kinase-like Gene Family AT3G05660 35.682 1.88e-115 370