Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00705 GTGCGAAATCTATGCTTGCTTTATATTGTATTGACCGAGACTGCGTCACGTACTGACACGTGCTTCGTCTTCAACTGCCATAACTACACTTCTCTTTTCTGATTCAGCATTTCCATTGCTCTCTGCATTTAAACGCCATTCCAAATTCTTCATTTCCCCACAATAAGTGTGTGGAAAGGTACTCGCTGGCGAACTTTGGGGAGGTTTTCTATCGTTTTGCCATGCGGGGACGGCAGCGAGTGGCATCCAGGGAACAGATACATGGCCATGATAAAGATGAAAGTTTAGCTTCAGTGCGTGTACCAAATGCCAAACCTTGTTGGCGGCGCTCTTTGCGGCATGTACTAGTTGCTTCTTTGTCTTCATTCTTGTATGGATACCACATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGATCTCAGCTTTAGTGGGAATACAATGGCTGAAGGTCTTGTGGTAAGTATATGCTTAGGAGGTGCTTTTGTTGGATCTTTGTTCAGTGGATGGATTGCAGATGGTGTTGGTCGTAGAAGAAGTTTCCAGTTTGCAACAGCAAAAACTCTGTGGGGCATGCTTTTGGGACGGTTATTTGTTGGTACTGGAATAGGACTTGGCCCACCTATTGTAGCTCTTTATGTTGCTGAGGTCTCACCTCCAGCTGTGCGAGGTGCTTTTGGGGCCTTAACCCAAATTGCAACATGTCTTGGACTCATGGGTGCTCTCTTTATTGGAATCCCAGCCAAGGATATAGTTGGTTGGTGGCGGATTTGTTTTTGGGTATCTATCATTCCTGCTACAATACTTGCCCTGTTTATGGAGATTTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAGAGGAAGAACCATTGAAGCTGAAGCTGAATTCGAGAAGCTCTTGGGAGGAGTACATGTGAAACCTGCTATAACTGAACTGTCAAAGTCTGACAGAGGTGATGGATCTGATACAGTCAACCTTTCAGAATTAATCTATGGCCGCCATTTTAGAGTGATGTTCATTGGATCTACGCTTTTTGCATTGCAGCAGCTATCTGGCATAAATGCTGTTTTCTATTTCTCTTCAACTGTTTTTGAAAGTTTTGGTGTACCATCAGATATTGCTAACACGTGTGTAGGAGTTTGCAATTTATTGGGGTCAGTTGTTGCAATGATTCTGATGGATAAACTTGGACGGAAAGTGCTTCTCCTGGGTAGCTTTCTGGGCATGGCGTTAGCAATGGGTCTACAAGTCATTGCTGCAAGTTCCTTTGCATCAGGATTTGGAGCAATGTATGTATCTGTTGGTGGCATGTTACTGTTTGTACTTTCATTTGCTTTGGGTGCTGGTCCAGTTCCTTGTCTTATCATTTCTGAAATACTACCTGGCCATATCAGAGCAAAGGCAATGGCAATTTGTCTGGCTGTGCATTGGGTGATAAACTTCTTCGTCGGTCTATTTTTTTTGCGCTTGCTGGAGCTCATTGGGGCGCAACTCCTGTATAGTATTTTTGGTTCATTTTGCTTGATAGCGGTGATTTTCGTGAAGAAATATATTCTGGAAACAAAAGGGAAGTCACTTCAGGAAATTGAAATTGTACTTCTTGCACAAGAAGCAAACTAAATGATCTGAAGTGGTCATGTGGAAAAGGGAAATTCGTGCTTTGGTTGCATGGGGACAATTTTTGAGAGCCTTTGATCATCTCATTCTATATTGAGTCTTTCTTTGAGTGCTCACTAAAAGGCATTTGTAAATTTTAGTGTGTTTTAATTCAATTTTGAACAGCCATTGATACTTTTGGACACTGAAATTGATA 1818 0.4224 MRGRQRVASREQIHGHDKDESLASVRVPNAKPCWRRSLRHVLVASLSSFLYGYHIGVVNETLESISIDLSFSGNTMAEGLVVSICLGGAFVGSLFSGWIADGVGRRRSFQFATAKTLWGMLLGRLFVGTGIGLGPPIVALYVAEVSPPAVRGAFGALTQIATCLGLMGALFIGIPAKDIVGWWRICFWVSIIPATILALFMEICAESPHWLFKRGRTIEAEAEFEKLLGGVHVKPAITELSKSDRGDGSDTVNLSELIYGRHFRVMFIGSTLFALQQLSGINAVFYFSSTVFESFGVPSDIANTCVGVCNLLGSVVAMILMDKLGRKVLLLGSFLGMALAMGLQVIAASSFASGFGAMYVSVGGMLLFVLSFALGAGPVPCLIISEILPGHIRAKAMAICLAVHWVINFFVGLFFLRLLELIGAQLLYSIFGSFCLIAVIFVKKYILETKGKSLQEIEIVLLAQEAN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00705 467 CDD MFS_GLUT_like 43 448 - -
Pste6g00705 467 SUPERFAMILY MFS general substrate transporter 26 458 IPR036259 -
Pste6g00705 467 Pfam Sugar (and other) transporter 41 460 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 ProSitePatterns Sugar transport proteins signature 1. 317 333 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 PRINTS Sugar transporter signature 362 383 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 PRINTS Sugar transporter signature 276 286 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 PRINTS Sugar transporter signature 385 397 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 PRINTS Sugar transporter signature 48 58 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 PANTHER SOLUTE CARRIER FAMILY 2 33 461 IPR045263 -
Pste6g00705 467 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 450 IPR020846 GO:0022857
Pste6g00705 467 Gene3D MFS general substrate transporter like domains 34 463 IPR036259 -
Pste6g00705 467 NCBIfam sugar porter family MFS transporter 41 457 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste6g00705 467 ProSitePatterns Sugar transport proteins signature 1. 96 113 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00705 Pste-Chr6 2658407 2672005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00705 5 406 Organic Solute Cotransporters AT1G67300 64.218 0.0 522