Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00703 GATAATGGCAAGGTTGCTTCTCCCTTTCCCATTTCCGTTTCTTTTAATGCCCCAAAACTGTGCTCTTCAATATGGACCCTTGGAACATGCCTCATTCAACAACCACACTGCTAGTGCAGGAAATGGACTGTGGGATTTGCACTTGGAAATGAAGGAAAGGCAACGTTGGAAGGCTGAAGAGGATGCATTGTTATGTGCTTATGTGAGACAGTATGGTCCAAGGGAATGGAACCTTGTGTCTCAGCGCATGAACACACCTCTCAACAGGGATGCAAAGTCATGTTTAGAAAGGTGGAAGAACTACCTAAAGCCTGGCATCAAGAAAGGGTCTCTAACAGAAGAAGAGCAGCGCCTTGTTATCCGGCTTCAAGCGAAGCATGGCAACAAGTGGAAGAAAATTGCTGCAGAAGTTCCAGGCAGAACTGCCAAGAGGTTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAGCAACAAAGGGAGAAGCAAGAAATTAAAAACACAATTGGCCCAGTTGATGACACCAAATATGATCATATACTAGAGACTTTTGCTGAGAAGCTAGTGAAAGAACACCCTTCACAATCATCATACCTTATTGCTGCATCAAATGGACCATTTCACCACACTGATGCACCTGTTCCTGCATCTGCATCATTAACAGCTGCATTGCTTCCTCCTTGGCTTTCAAATTCTAGCACCACCAATTCATCAGCAATTAGGCCATCTTCCCCTTCTGTGACCCTAAGCCTCTCCTCCTCCACCGCCCCTCATCATTGGTTGCAACCCGAGAGAGGACCCGGGAATGTAAAAACTACACCTCATGGTGATAAGATGGTAGTGTCTGATAAGTTGATAGAATGCTGTAAAGAGTTGGAAGAAGGGCATCGAGCTTGGGCTGCACATAGGAAGGAGGTGGCATGGCGGTTGAGAAGGGTGGAGCTGCAGTTGGAGGCAGAGAAAGCAAGTCGAAGGAGGGAGAAGATGGAGGAAATTGAAGCAAAGATTAAGGCTCTTTGGGAAGAACAAAATGCTGCTTTGGATAGAATTGAAGCAGAATATAGAGAACAGTTAGCAGTGTTAAGGAAAGATGCAGAAAGCAAGGAGCAGAAGTTGGTTGAGCAATTGAATGTAAAGCACATGAGAGTAGTGAAGTGTATGGAACAAGTAGGATGTAGAGTACCTCGGATTGCTGAACCTAGTGGAAGA 1204 0.4543 MARLLLPFPFPFLLMPQNCALQYGPLEHASFNNHTASAGNGLWDLHLEMKERQRWKAEEDALLCAYVRQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKQEIKNTIGPVDDTKYDHILETFAEKLVKEHPSQSSYLIAASNGPFHHTDAPVPASASLTAALLPPWLSNSSTTNSSAIRPSSPSVTLSLSSSTAPHHWLQPERGPGNVKTTPHGDKMVVSDKLIECCKELEEGHRAWAAHRKEVAWRLRRVELQLEAEKASRRREKMEEIEAKIKALWEEQNAALDRIEAEYREQLAVLRKDAESKEQKLVEQLNVKHMRVVKCMEQVGCRVPRIAEPSGR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00703 400 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 49 394 - -
Pste6g00703 400 SMART sant 106 154 IPR001005 -
Pste6g00703 400 SMART sant 51 103 IPR001005 -
Pste6g00703 400 CDD SANT 111 152 IPR001005 -
Pste6g00703 400 ProSiteProfiles Myb-like domain profile. 102 152 IPR001005 -
Pste6g00703 400 ProSiteProfiles Myb-like domain profile. 47 101 IPR001005 -
Pste6g00703 400 Gene3D - 110 167 - -
Pste6g00703 400 MobiDBLite consensus disorder prediction 228 273 - -
Pste6g00703 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 156 IPR017930 -
Pste6g00703 400 Pfam Myb-like DNA-binding domain 55 116 - -
Pste6g00703 400 MobiDBLite consensus disorder prediction 228 256 - -
Pste6g00703 400 CDD SANT 54 101 IPR001005 -
Pste6g00703 400 Coils Coil 307 329 - -
Pste6g00703 400 FunFam MYB-related transcription factor 52 106 - -
Pste6g00703 400 Gene3D - 52 106 - -
Pste6g00703 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 101 IPR017930 -
Pste6g00703 400 Coils Coil 348 368 - -
Pste6g00703 400 SUPERFAMILY Homeodomain-like 52 146 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00703 Pste-Chr6 2654102 2657635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00703 49 393 MYB Transcription Factor Family AT2G37630 61.828 3.84e-147 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g00703 Myb_DNA-bind_6 9.6e-14 CL0123