Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00700 ACTTCATTCATTACACAATACCAATCCCTCAGTTACGGAAACACAATAGTTTCACCTCATGGAATATTCGAACTGGGTTTCTTCAATCTTGGAAATCCCAACAAAATCTACCTTGGGATTTGGTACAAGAATGTACCACTTAAAGATGTAGTTTGGGTTGCAAATGGTGGCAGCCCAATCAAGGCTTCTTCCATCTTGAAACTCAACAGGTATGGCAATTTGGTTCTTACATACAATAACAAAGTTGTATGGTGCACAAGTTCTTCAGAAACTGTGCAGAATCCAGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGAGATGAGAACAGAACAAAGGCATATACATATCTGTGGCAAAGCTTTGATTATCCATCTAATACAATGCTGCCAGGAATGCAGATTGGATGGAACCTAAAGAGAAATCTTAGTACTCACTTGATAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGACTTATCTTGGGGCATTATCTTGCACCCTTATCCTGAGATCTGCATCATGAAGGGAACAAAAAAGTATTATAGACTTGGACCATGGAATGGTTTGCGTTTTAGCGGCAGGCCACTTATGAAGCTTAATGACCCTTCTAACAATTACGAGTTTGTCTCTAACAAAGAAGAGGTTTACTACAGATGGAGCCTAAAGCAGACTAGTTTAATATCAAGAGTGGTACTTAACCAAACCACAAAAGAACGTCGTCGTTATCATGGCCATCAATCTTATTGTTATATGGCTTTAATGACCAGAGTTTCAACTTGCTATAGATTTAAGACATTGAATAAGTCAAAGACAGAAGAGAACATCATCCGACAGCTAGAAGATCTGGACGTGCCATTGTTTGGTCAGCTAACAATCTCTACTGCCACTAACAATTTCTCATTGAATAATAAGATTGGACAAGCGGTTTCGGGTCTGTATGGAAAATTAGTGGATGGGCAAGAAATCGCTGTCAAGAGACTTTCAAGTTTCTCTGGACAAGGAATAACTGAGTTTATAACAGAAGTAAAATTGATTGCGAAGCTTCAACACAGAAATCTTGTAAAGCTACTAGGTTATTGCTTTCGAGGACAAGAAAAATTATTAGTATATGAATACATGGTTAATGGAAGCTTGGACACCTTCATTTTTGGGAAAAATGCTTTACAATTGATTGACTCAAGCATAAAAGATTCTTGTGTCATCCTGGAGGTACTGCGATGCATCCATGTTAGTCTCTTGTGCTTGCAACAATACCCGAAGGATAGACCAACAATGTCCTCAGTAATTCAAATGTTAGGGAGTGAGATGGAATTAGTTGAGCCAAAAGAGCCTGCTTTCATAACAGCCGAGACTTCATCCATTACTCAATCCCAGTCCCTCAGTTATGGAAACACCATAGTTTCCTCACGGGGAATCTTTGAACTTGGCTTCTTCAATCTTGGCAACAAAACCTACCTTGGGATTTGGTACAAGAATATTCCACTGCAAAACGTTGTTTGGGTAGCAAATGGTGGCAGTCCAATAAATGCTTCTTCTTCAATCTTGAAACTAAACAGTTCTGGCAGTTTGGTCCTCACACACAACAACATGGCTGTTTGGAGTACTAGTTCTCCAGAAAAGGCAAAGAATCCGGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGGGAAGAGAATGGAGAAGAGGGAGAGACATATCTGTGGCAAAGCTTTGATTACCCTTCTAATACAATGCTGGCAGGCATGAAGATTGGATGGGATCTTAGGAAAAATTTTAGTACTCGTCTCATAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGACTTATCTTGGGGCATTACCCTGCATCCTTATCGTGAGATCTATATGATGAAAGGAACACAAAAGTACCACAGGCTTGGACCATGGAATGGTTTGCGTTTCAGTGGTAGGCCACTTATGAAGCCTAATGATCCCATTTACCATTATGAGTTTGTCTCCAACAAGGAAGAGAACGTCGTCGTTATGTATGGGAAATCATGGAGTTTATATGCAACAATGCCAGAAGACAACTGTGACCATTATGGAGCTTGTGGAGCCAATACATATTGCACCACTTTTACATTACCAATGTGTCAATGCTTAAAAGGGTACAAGCCAAAGTCTCCTGAGAAATGGAACTCAATGGATTGGTCCGATGGATGTGTCCTGAAACATCCACTTAGCTGCAAAGATAAGCTCAGTGATGGGTTCTTACTTCTTGAAGGCTTGAAAGTGCCAGATACTACAGATACAACCAAGTGCTTGAATAATTGTTCTTGCATGGCTTATGCCAATTCAAATATAAGTGGAACAGGCAGTGGCTGTGTTATGTGGTTTGGAGATTTATTAGACATTAAAAAGTTTCCAGTTCCAGAAAATGGGCAGCCTTTAAATATAAGGTTGGATGCTTCAGAATTAGATGCTATCAGGCACAAGAAGAACTCAAAAATAATTATTGTAACCTCTATTGCTGCAACTTTAGTAGTGACACTTGCTATTTTTTTCATCTGCAGAAGAATCATTGCTGATAAGTCAAAGACAAAAGAGAACATGGAAAGACAGCTAGAAGATCTGGATGTGCCATTATTTGATTTGATAACAATCACTAATGCCACTAACAATTTCTCATCATATAATAAGATTGGAGAAGGTGGTTTTGGACCTGTATATAAGGGAAGATTAGTGGATGGGAAAGAAATTGCTGTCAAAAGACTTTCAACTAGCTCTGGACAAGGAACAAATGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAACCTTGTAAAGCTCCTTGGCTGTTGCTTTGGACAACAAGAAAAATTACTCGTATATGAATACATGGCTTGGACACTTTGGAAAGAGCAAAATGCTTTACAGTTGATTGACTCCAGCATAAAGGACTCATGTGTTATCCCAGAAGTCCTGCGGTGCATCCATGTTAGTCTCTTGTGCTTGCAACAATATCCAGAGGATAGGCCAACCATGGCCTCAGTAATTCAAATGTTAGGGAGTGAGATGGAACTGGTTGAGCCAAAAGAGGTAGGTTTCTTTCAAAAGAGGATGTGCGACGAAGGAAAATCAAGCTCAACTCTAGACCAAATGAGTTATAATCATGAATTATCCTTTACCTCATTCGATGGC 3189 0.3986 TSFITQYQSLSYGNTIVSPHGIFELGFFNLGNPNKIYLGIWYKNVPLKDVVWVANGGSPIKASSILKLNRYGNLVLTYNNKVVWCTSSSETVQNPVAELLDSGNLVIRDENRTKAYTYLWQSFDYPSNTMLPGMQIGWNLKRNLSTHLIAWKSDDDPTPGDLSWGIILHPYPEICIMKGTKKYYRLGPWNGLRFSGRPLMKLNDPSNNYEFVSNKEEVYYRWSLKQTSLISRVVLNQTTKERRRYHGHQSYCYMALMTRVSTCYRFKTLNKSKTEENIIRQLEDLDVPLFGQLTISTATNNFSLNNKIGQAVSGLYGKLVDGQEIAVKRLSSFSGQGITEFITEVKLIAKLQHRNLVKLLGYCFRGQEKLLVYEYMVNGSLDTFIFGKNALQLIDSSIKDSCVILEVLRCIHVSLLCLQQYPKDRPTMSSVIQMLGSEMELVEPKEPAFITAETSSITQSQSLSYGNTIVSSRGIFELGFFNLGNKTYLGIWYKNIPLQNVVWVANGGSPINASSSILKLNSSGSLVLTHNNMAVWSTSSPEKAKNPVAELLDSGNLVIREENGEEGETYLWQSFDYPSNTMLAGMKIGWDLRKNFSTRLIAWKSDDDPTPGDLSWGITLHPYREIYMMKGTQKYHRLGPWNGLRFSGRPLMKPNDPIYHYEFVSNKEENVVVMYGKSWSLYATMPEDNCDHYGACGANTYCTTFTLPMCQCLKGYKPKSPEKWNSMDWSDGCVLKHPLSCKDKLSDGFLLLEGLKVPDTTDTTKCLNNCSCMAYANSNISGTGSGCVMWFGDLLDIKKFPVPENGQPLNIRLDASELDAIRHKKNSKIIIVTSIAATLVVTLAIFFICRRIIADKSKTKENMERQLEDLDVPLFDLITITNATNNFSSYNKIGEGGFGPVYKGRLVDGKEIAVKRLSTSSGQGTNEFITEVKLIAKLQHRNLVKLLGCCFGQQEKLLVYEYMAWTLWKEQNALQLIDSSIKDSCVIPEVLRCIHVSLLCLQQYPEDRPTMASVIQMLGSEMELVEPKEVGFFQKRMCDEGKSSSTLDQMSYNHELSFTSFDG 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00700 1063 SMART blect_4 7 126 IPR001480 -
Pste6g00700 1063 SMART blect_4 460 578 IPR001480 -
Pste6g00700 1063 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 157 IPR036426 -
Pste6g00700 1063 FunFam Os04g0303100 protein 40 183 - -
Pste6g00700 1063 FunFam Os04g0303100 protein 491 635 - -
Pste6g00700 1063 SUPERFAMILY Protein kinase-like (PK-like) 867 969 IPR011009 -
Pste6g00700 1063 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 455 1009 - -
Pste6g00700 1063 Gene3D Phosphorylase Kinase; domain 1 278 375 - -
Pste6g00700 1063 ProSiteProfiles Bulb-type lectin domain profile. 454 572 IPR001480 -
Pste6g00700 1063 Gene3D - 1 123 IPR036426 -
Pste6g00700 1063 Gene3D - 448 575 IPR036426 -
Pste6g00700 1063 Pfam PAN-like domain 744 797 IPR003609 -
Pste6g00700 1063 SUPERFAMILY alpha-D-mannose-specific plant lectins 501 609 IPR036426 -
Pste6g00700 1063 FunFam Uncharacterized protein 310 375 - -
Pste6g00700 1063 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 851 962 - -
Pste6g00700 1063 ProSiteProfiles Bulb-type lectin domain profile. 1 120 IPR001480 -
Pste6g00700 1063 CDD PAN_AP_plant 737 813 - -
Pste6g00700 1063 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 123 - -
Pste6g00700 1063 SMART ntp_6 744 813 IPR003609 -
Pste6g00700 1063 CDD B_lectin 460 578 IPR001480 -
Pste6g00700 1063 Pfam Protein tyrosine and serine/threonine kinase 890 964 IPR001245 GO:0004672|GO:0006468
Pste6g00700 1063 Pfam Protein tyrosine and serine/threonine kinase 320 388 IPR001245 GO:0004672|GO:0006468
Pste6g00700 1063 SUPERFAMILY Protein kinase-like (PK-like) 283 390 IPR011009 -
Pste6g00700 1063 CDD B_lectin 8 126 IPR001480 -
Pste6g00700 1063 ProSiteProfiles Protein kinase domain profile. 887 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00700 1063 Pfam S-locus glycoprotein domain 184 249 IPR000858 GO:0048544
Pste6g00700 1063 Pfam S-locus glycoprotein domain 676 720 IPR000858 GO:0048544
Pste6g00700 1063 Pfam D-mannose binding lectin 501 604 IPR001480 -
Pste6g00700 1063 Pfam D-mannose binding lectin 50 152 IPR001480 -
Pste6g00700 1063 Gene3D Phosphorylase Kinase; domain 1 849 962 - -
Pste6g00700 1063 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 450 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00700 Pste-Chr6 2649090 2660869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00700 830 963 Receptor kinase-like Gene Family AT4G23190 47.761 3.07e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste6g00700 B_lectin 4.4e-32 No_clan