Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00698 GTTTCCATTGCTTGCGATCTAAATTCACAATGATTTTAACGAAAAGCACTTGAATTTGAAGATGGACAAAATGGAAGTGGATGAAACTTCTGCACCCAAAGAGGGAAACCCTGCTTTGGTGATCTTGGTGGGTGCACCGGGGAGTGGGAAGTCCACCTTCTGCGAAGAAGTAGCGCGTTCCTCCACTCGCGCTTGGGTTCGCGTTTGCCAGGTTCAGTTCACTCCCTTCTATCTGTTCGATGAAATGTCTCAGTGGGTTTCACTTTCATCACTCGATATTTTTGTTTTTACCACGGTAATCACTGATAAGGACACTATTGGAAATGGTAAAGCAGGAAATAAAGCTCAGTGCCTGAGCACTGCAATTAGAGCATTGAAGGATGGGAAAAGTGTATTTATTGATAGGTGCAATCTTAACAGAGAACAGCGTTCAGAATTTGTAAAGCTTGGTGGTGAACCACAAATAGATGTCCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCAGTCAAACGAACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAACATAAAGAGCTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAGTGATGTAAAAAATGCTATTAATACATATAGCACACTTGGGGCACTGGATAGTCTTCCACATGGTTGCTTTGGCCAGAAGAATCCAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTGTTTCTGCATCTAGAGAGAGTGGCATTGAAGACCCTACTTCCCAGACTCCAGGGAAAAATAATTCTTGCTGCACAGATAAAGAAACACTTTCCTCAATTCCAGATGATGCCAACTTAGAGAAAATGGAAGTAGAAGGCCAAGCAGTTTGCTCTGCCAGTTCCCATGCGAATCAAGTTTCAATGGATAATATTCCTACTCTGGCATTTCCTTCTATTTCGACATCCGATTTCCAATTCGACCATGAGAAGGCAGCTGATATTATTGTTAAGAAGGTTGCAGAGTTCTTGAATAAAATTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCATAAGTCAAAGATTTTGTCCTTAGTTAAAGCCAAAGTTGCAGAGAAAAACATTGACACCCAAAAGTTCTTTACCCATGTTGGGGACATTACTTATCTCTATTCTAAGGGAGGTTTGCAATGTAATGTCATTGTTAATGCTGCCAACTGGCGGTTGAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCTGAATTGGAATCTGCAACAAAACAAAAAGTAAAATCTCTTTCACCTGGGAACGCTGCTGTTGTCCCTCTACCATCATCTTCTCCTTTGTTTACCAGAGAGGGTGTAACCCATGTGATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTACATTAAAGGCTGCAAAATTCTCGAAGATGCTTATACTTCACTTTTTGAAGGTTTTGCATCTATTGTGAGGAACAAGCCAGGGAAAACAGAGGGAAAAAGTGAAAACCTTGAAAGAAAGTCTTTGGAGTTACAGGTTCAGTCTGATTCTTGTTCCAGAAATCATTTCGCAAATACTGATCGGAAGAGTAAGAGAGATGCTGATCATGGTTTGGAAAAAAGCAAGAAATACAAGGGAACTCAGGATGGCTTTGGATTGACCTTTATTGATTCTAGGGTTGCAAAGGTAGATACAGAGCATAAAAGAACTGAGAGGAGCACGAGTAAGGCATGGGGATCATGGACTCAAGCTCTTCACCAAATAGCTATGCATCCTGAGAAACATAAGGGTGACTTGCTTGAAATTTCTGAAGATGTTGTCGTATTGGATGATATGTATCCCAAGGCACGGAAGCATGCTCTGGTGTTGGCACGAATTGAGGGTCTTGACTGCCTGGCAGATGTCCGAAAGGAGCATCTTCTGTTATTGAACAAGATGCATGATGTGGGATTAAAGTGGGCGAAGAAGTTCTTGAACGAGAATGCTTCTTTGGTATTTCGTCTTGGATATCACTCGGCACCATCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTTGAATCAACACATTTAAAGAAGCACTGGAACTCGTTTACCACTGCATTCTTTCGTGACTCGGTTGATGTAATGGATGAGATCTCTAGTTATGGGAAGGCAACAATAAAAGTTGATGACAAGCTACTATCTATGGAGTTGAGGTGCCACAAATGTAGAAGTGCGCATCCAAACATACCCCGATTAAAATCACACATTAGCAGCTGCCATTCACCCTTCCCGGCTCACCTACTTCAAAACGGCCGTTTGGTGCGTGCACCAGGGGAAACTGGTAACAATGTCCAGTAGTACTAGTTTTTTGGTCTACACTACTGCTAAGCAAGACTAGTTTTGAGCTTCTTATTTTACACAAGATTTAACCATCACGTGTAGTTAAAGATTCAAGAACTTTTGCCATCTATGAAGGAAAAAGGAGGGTGTTAAATCTGCAATCATGCAAATTGCTTTTGCGTTAATAATTTTAG 2628 0.4098 MDKMEVDETSAPKEGNPALVILVGAPGSGKSTFCEEVARSSTRAWVRVCQVQFTPFYLFDEMSQWVSLSSLDIFVFTTVITDKDTIGNGKAGNKAQCLSTAIRALKDGKSVFIDRCNLNREQRSEFVKLGGEPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFNRITFCQNESDVKNAINTYSTLGALDSLPHGCFGQKNPDSKIQVGIMKFLKKAEVPLVSASRESGIEDPTSQTPGKNNSCCTDKETLSSIPDDANLEKMEVEGQAVCSASSHANQVSMDNIPTLAFPSISTSDFQFDHEKAADIIVKKVAEFLNKIRNARLVLVDLSHKSKILSLVKAKVAEKNIDTQKFFTHVGDITYLYSKGGLQCNVIVNAANWRLKPGGGGVNAAIFNAAGPELESATKQKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYIKGCKILEDAYTSLFEGFASIVRNKPGKTEGKSENLERKSLELQVQSDSCSRNHFANTDRKSKRDADHGLEKSKKYKGTQDGFGLTFIDSRVAKVDTEHKRTERSTSKAWGSWTQALHQIAMHPEKHKGDLLEISEDVVVLDDMYPKARKHALVLARIEGLDCLADVRKEHLLLLNKMHDVGLKWAKKFLNENASLVFRLGYHSAPSMRQLHLHVISQDFESTHLKKHWNSFTTAFFRDSVDVMDEISSYGKATIKVDDKLLSMELRCHKCRSAHPNIPRLKSHISSCHSPFPAHLLQNGRLVRAPGETGNNVQ 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00698 796 FunFam Transcription factor bHLH140 358 505 - -
Pste6g00698 796 Pfam Scavenger mRNA decapping enzyme C-term binding 605 709 - -
Pste6g00698 796 Gene3D Leucine Aminopeptidase, subunit E, domain 1 291 356 IPR043472 -
Pste6g00698 796 MobiDBLite consensus disorder prediction 536 557 - -
Pste6g00698 796 FunFam Transcription factor bHLH140 75 209 - -
Pste6g00698 796 FunFam aprataxin isoform X2 593 771 - -
Pste6g00698 796 Pfam Macro domain 400 478 IPR002589 -
Pste6g00698 796 SUPERFAMILY Macro domain-like 358 498 IPR043472 -
Pste6g00698 796 PANTHER APRATAXIN-RELATED 312 770 - -
Pste6g00698 796 MobiDBLite consensus disorder prediction 249 270 - -
Pste6g00698 796 MobiDBLite consensus disorder prediction 252 270 - -
Pste6g00698 796 Pfam AAA domain 19 178 - -
Pste6g00698 796 MobiDBLite consensus disorder prediction 529 557 - -
Pste6g00698 796 ProSitePatterns HIT domain signature. 681 699 IPR019808 -
Pste6g00698 796 Gene3D Leucine Aminopeptidase, subunit E, domain 1 357 504 IPR043472 -
Pste6g00698 796 SMART YBR022w_8 377 658 IPR002589 -
Pste6g00698 796 SUPERFAMILY Macro domain-like 308 354 IPR043472 -
Pste6g00698 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 195 IPR027417 -
Pste6g00698 796 Gene3D - 2 209 IPR027417 -
Pste6g00698 796 Gene3D - 594 773 IPR036265 -
Pste6g00698 796 ProSiteProfiles Macro domain profile. 365 569 IPR002589 -
Pste6g00698 796 SUPERFAMILY HIT-like 586 754 IPR036265 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00698 19 785 C2H2 Transcription Factor Family AT5G01310 56.827 0.0 844