Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00696 TTTTGTAAGATTGTAAGGTCAAATTTCAGTATTTCTGTTTCTCTTCATTCTTCTCTCCCCACTCAGATATTATCATTTCCCATTGTCACCTATGCCTTTCTCATTCCCTTTTCTCTCCCTCTCCCCTTGTCTTTACCCGGTTTGATGATGCCAATCAGCATTCCTAACTCCTATTGTGATTGGTGTCGTTTCGTCCCCCAGATTATGCAGCTAATTTCAAGACATGGGCTGTGGGATTTGCACATGGAAATGAAGGAGAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTACTACGTTCTTATGTCAAACAGTACGGTCCTAGGGAATGGAACCTCGTCTCTCAGCGCATGAAAACACCCCTTAACAGGGATGCGAAGTCATGTTTGGAGAGGTGGAAGAACTACCTCAAACCCGGTATCAAAAAAGGATCTCTAACCGAAGAAGAGCAGCGCCTTGTGATACGGCTGCAAGCGAAATATGGGAACAAATGGAAGAAAATCGCTGCAGAAGTCCCCGGTCGCACTGCTAAGCGGTTAGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAGCAAAGAGAGAAGAAGGAGATCAGTAGAATCTCTGACCCTGTCAACAGCAGTAAGTATGAGCACATACTTGAGAGTTTTGCAGAGAATCTAGTGAAGGAACGGCCTTCACCATCGTTTGTCATGGCTGCTTCTGATGACTTGTTTCTGCAAACTGATGCACCAGCACCTGCATCAGCCTTGCTTCCTTGTTGGCTTTCCAGTTCTACAGCCGTCAGCCCTAGCTCCCTTTCTGTCACACTAAGTCTTTCTTCCTCGCCCGCGCCTTCATATTCGTGGCTGCAATCTGAGAGAGGACCAGACAATGCTGCTCCTTTTGTTATGGGAAATAATGCTGCAGAGGCAGCAGCACTTCACAGAACTATTCCAGCTTTAAGTGATAAGAGTCCTGTATCTCAGATGGTGGAGCACTGTAAAGAGATGGAAGAGGCGCACTGTGCTTTGGCCATGCACAAGAAGGAGGCCGCGTGGAGGTTAAGTCGGGTGGAGCTGCAGTTGGAGTCTGAGAAGGCAAGCCAAAGACAGAACAAAATTGAAGAGTTTGAAGCAAAGATTAAAGTTCTTCAGGAAGAGGAGAAAGCTGTTTTGGGTAGAATTGAAGCAGAATACAGAATACAGAATACAGAGAACAGTGCATTGAGGAGAGATGCTGAAAACAAGGAGCAAAAGTTAGCAGAACAATGGACTGCAAAGCATTTAAGGCTGACTAGGTTACTAGAGCAATTAGGATGCAGAGCAGGGCTCCCTAAGCCAAATGCAAGATGA 1332 0.4617 FCKIVRSNFSISVSLHSSLPTQILSFPIVTYAFLIPFSLPLPLSLPGLMMPISIPNSYCDWCRFVPQIMQLISRHGLWDLHMEMKERQRWRAEEDALLRSYVKQYGPREWNLVSQRMKTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEISRISDPVNSSKYEHILESFAENLVKERPSPSFVMAASDDLFLQTDAPAPASALLPCWLSSSTAVSPSSLSVTLSLSSSPAPSYSWLQSERGPDNAAPFVMGNNAAEAAALHRTIPALSDKSPVSQMVEHCKEMEEAHCALAMHKKEAAWRLSRVELQLESEKASQRQNKIEEFEAKIKVLQEEEKAVLGRIEAEYRIQNTENSALRRDAENKEQKLAEQWTAKHLRLTRLLEQLGCRAGLPKPNAR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00696 443 Pfam Myb-like DNA-binding domain 90 151 - -
Pste6g00696 443 Gene3D - 87 141 - -
Pste6g00696 443 CDD SANT 89 136 IPR001005 -
Pste6g00696 443 FunFam MYB-related transcription factor 87 141 - -
Pste6g00696 443 Gene3D - 145 207 - -
Pste6g00696 443 Coils Coil 353 387 - -
Pste6g00696 443 ProSiteProfiles Myb-like domain profile. 82 136 IPR001005 -
Pste6g00696 443 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 84 436 - -
Pste6g00696 443 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
Pste6g00696 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Pste6g00696 443 SMART sant 141 189 IPR001005 -
Pste6g00696 443 SMART sant 86 138 IPR001005 -
Pste6g00696 443 CDD SANT 146 187 IPR001005 -
Pste6g00696 443 SUPERFAMILY Homeodomain-like 87 181 IPR009057 -
Pste6g00696 443 Coils Coil 392 412 - -
Pste6g00696 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 191 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00696 Pste-Chr6 2625994 2630060 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00696 84 438 MYB Transcription Factor Family AT2G37630 56.579 5.30e-130 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g00696 Myb_DNA-bind_6 3.3e-14 CL0123