Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00695 ATGGGCGTCAACATGTCGGACAAACCTCCTCACACCAAAGACTTGTTTTCCTCTCCGGCTCTTTCTCTCAGCCTAGCTGGAATTTTCCGCCATGCCGGGGAGACGTCCGGCATGGAGGTGTTGGGCGATGAGGTCCGGCGAGAGGACACTGTTGATGTTAGTAGCGACAACTCGGGACCCCTGAGATCCAGGTCCGACGAAGATTTTGACGGAGATAACGACGATGACGCTGTTCACAAGAACAGAAAGAGGAAGAAGAGAAAGTATCACAGACACACCGCTGAACAGATCAGAGAAATGGAAGCGCTTTTCAAGGAATCACCACATCCTGATGAAAAGCAGAGGCTACAACTCAGCAAGCAACTTGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATTAAGGCAATACAAGAGCGCCATGAAAATTCATTGTTGAAGACAGAATTAGAGACACTAAAGGAGGAAAATAAGGCCATGCGGGAGACCATAAACAAATCTTGTTGCCCCAATTGTGGCATGGTAACGGCTAGCCTAGATGCTTCCATGTCCACTGAAGAAAAACAACTTCTTATCGAAAATGCCAAACTCAAAGCCGAGGTAGAGAAGCTCCGAGCAGCGTTAGGGAAATTCTCACCAAGGTCAACGTCTCCTACATCTTCTGCGGGTCATGATGAGGAAGAGCATAGAAGCTCTTTGGATTTTTACAATGGAATTTTTGGGCTCGAGAAATCAAGGATAATGGAAATAGTGAACCGGGCAACGGAAGAGCTCATAAAGATGGCTAACATGGGGGATCCATTATGGGTTCGTAGCGTTGAGACGGGTCGTGAAATCCTTAACTACGATGAATATGTGAAGGAATTCGCAGTTGAAAATTCGAGCAGTGATAGGCCCAAGACATTCATCGAAGCCTCAAGAGAAATCGAGGTTGTTTTTATGGATCTCCCTCGGCTTCTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAAATGTTTCCGTGCTTAATATCAAAGGCTGTAACTGTAGATGTTATATGTAATGGAGAAGGTTCCAACAGGAATGGTGCAGTGCAATTGATGTTTGCGGAGCTGCAAATGCTTACTCCAATGGTGCCCACCAGAGAAGTGTATTTTGTGAGATGCTCCAAACAATTGAGTGATGAACAGTGGGCAATAGTTGATGTCTCCATAGACAAAGTAGAAGACAACATCGATGCGTCACTTGTGAAATGCAGAAAACGCCCATCTGGTTGTATTATTGAGGACAAGTCAAATGGCCATTGCAAGGTGATATGGGTGGAGCATTTGGAATGCCAAAAGAGCACAATTCAGACAATGTATCGAACCGTTGTCAACAGTGGTTTAGCTTTTGGGGCAAGGCACTGGATATCAACACTGCAACTTCAATGCGAACGTCTAGTTTTTTTCATGGCAACGAATGTTCCCATGAAGGATTCAACTGGTGTTTCCACATTGGCTGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATCGAGTTTCTGCCATGCAGTCGGCGCGTCAAGTTTCCATACATGGACCAAGGTCACAAGTAAAACAGGAGAAGACATAAGGATTAGTTCTAGGAAGAACTTGAATGAACCCGGTGAACCTCTTGGGGTTGTATTGTCTGCAGTTTCTTCTGTATGGCTTCCTGTCTCTCCTAATGTTCTTTTTGACTTTTTGAGGGATGAAGCTCGTCGAAGTGAGTGGGATATCATGGCCAGTGGTGGGTCAGTGCAGTCCATTGCAAATTTAGCTAAAGGAAAAGACCGAGGCAATGTTGTAAACATCCAGAAAATACAATCAAAAGATAATAGTGTATGGATATTGCAAGATAGCTGCACAAGTGCTTATGAGTCAATGGTGGTATATGCTCCTGTGGACTTTGCTGGTATCCATTCTGTGCTGACAGGATGTGATTCAAGTAATCTTGCTATATTGCCGTCAGGATTCTCAATTCTTCCTGATGGGGTTGAGGGAAGGTCATTGCTGATTACGTCAAGGCAAGAAAAAAGCACAGAAGGAGGGTCTTTATTTACAATGGCATTCCAGCTCCTTTCCAGCCCTTCTCCAACAGCCAAGTTAACAATGGAGTCTGTGGAATCGGTCAATAATATTTTGTCTTGTACATTAAGCAATATAAGAACAAGTTTAAACTGTGAAGATGATTAA 2220 0.4414 MGVNMSDKPPHTKDLFSSPALSLSLAGIFRHAGETSGMEVLGDEVRREDTVDVSSDNSGPLRSRSDEDFDGDNDDDAVHKNRKRKKRKYHRHTAEQIREMEALFKESPHPDEKQRLQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTELETLKEENKAMRETINKSCCPNCGMVTASLDASMSTEEKQLLIENAKLKAEVEKLRAALGKFSPRSTSPTSSAGHDEEEHRSSLDFYNGIFGLEKSRIMEIVNRATEELIKMANMGDPLWVRSVETGREILNYDEYVKEFAVENSSSDRPKTFIEASREIEVVFMDLPRLLQSFLDVNQWKEMFPCLISKAVTVDVICNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCSKQLSDEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIQTMYRTVVNSGLAFGARHWISTLQLQCERLVFFMATNVPMKDSTGVSTLAGRKSILKLAQRMTSSFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNEPGEPLGVVLSAVSSVWLPVSPNVLFDFLRDEARRSEWDIMASGGSVQSIANLAKGKDRGNVVNIQKIQSKDNSVWILQDSCTSAYESMVVYAPVDFAGIHSVLTGCDSSNLAILPSGFSILPDGVEGRSLLITSRQEKSTEGGSLFTMAFQLLSSPSPTAKLTMESVESVNNILSCTLSNIRTSLNCEDD 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00695 739 ProSiteProfiles 'Homeobox' domain profile. 83 143 IPR001356 GO:0003677
Pste6g00695 739 SUPERFAMILY Homeodomain-like 71 144 IPR009057 -
Pste6g00695 739 SMART START_1 255 479 IPR002913 GO:0008289
Pste6g00695 739 SMART HOX_1 85 147 IPR001356 GO:0003677
Pste6g00695 739 MobiDBLite consensus disorder prediction 61 80 - -
Pste6g00695 739 Pfam Homeodomain 86 141 IPR001356 GO:0003677
Pste6g00695 739 ProSiteProfiles START domain profile. 246 482 IPR002913 GO:0008289
Pste6g00695 739 MobiDBLite consensus disorder prediction 34 92 - -
Pste6g00695 739 Pfam START domain 256 479 IPR002913 GO:0008289
Pste6g00695 739 CDD START_ArGLABRA2_like 250 478 - -
Pste6g00695 739 MobiDBLite consensus disorder prediction 215 235 - -
Pste6g00695 739 FunFam Homeobox-leucine zipper protein HDG1 71 159 - -
Pste6g00695 739 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 83 735 IPR042160 -
Pste6g00695 739 CDD homeodomain 93 141 IPR001356 GO:0003677
Pste6g00695 739 SUPERFAMILY Bet v1-like 501 673 - -
Pste6g00695 739 Gene3D - 72 155 - -
Pste6g00695 739 ProSitePatterns 'Homeobox' domain signature. 118 141 IPR017970 GO:0000981|GO:0006355
Pste6g00695 739 FunFam Homeobox-leucine zipper protein GLABRA 2 255 478 - -
Pste6g00695 739 Coils Coil 142 169 - -
Pste6g00695 739 SUPERFAMILY Bet v1-like 248 479 - -
Pste6g00695 739 Gene3D - 314 475 IPR023393 -
Pste6g00695 739 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00695 Pste-Chr6 2622787 2628151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00695 53 738 Homeobox Transcription Factor Family AT1G79840 64.296 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste6g00695 START 6.1e-55 CL0209