Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00672 CGGAATCGAAAATGGAAGGGACGCCAAAATTCCCAGGGTTTCCTTTCGAACCGTACTCGATTCAGATTGATTTCATGAAGAGTTTGTATGAATCGCTCAATGAAGGTGGCGTGTCTATGTTGGAAAGCCCAACTGGAACTGGGAAGACAATGAGTGTGATTTGCAGTGCTTTGCAATGGGTGCTTGATCGGAGGCTACAACAAGAGGCGGCGTGTGGTGAGGATGAAGGGAACCACGCGGATGATGAACCTGATTGGATGAGAGACTTTGTCGTCAACAAACACGAGAATAATAAAAAGGAAGACAGGCGGGGAAAACCTTATAGCAACAAGAAGATTAACGAAATTCCTAGGGTTATGGGCGTTGGAGAGAAAAGTTTACAAAACAAGAACAAAATCGATGCAGTGGATATTAGCGATAAGGAGTTTTTGCTAGAGGAATACGAGAGTGACGATGAGGAAGGTGTAGGGCCCAAGAGGAAGGCTGTTAAAACCTCCTTTAGTTCCTCCAGTGAAGATGAGTCTGGTGAGGAGGAGAACAAGTTTAAGGTTTATTTCTGCAGTCGAACTCATTCACAGCTTTCGCAGTTCATAAAGGAGTTACGGAAGACCGTCTTTGCTAATGAGATGAATGTTGTGAGTTTAGGCTCCAGGAAAAATCTTTGCATTAATGAAGAAGTAGTTGCCCTTCGAAACTCCACACGCATCAACGAGCGATGTTTGGAACTCCAGAAGAAAAACATAAATGATGCTAAAAAACTTAAGAACGTAAAAGTAGGTCCATGGTTACCCAGAACAAAGGTTTCCTCTGGTTGCCCAATGCTTAGAAAACACAGAGTTCAGCAAGAATTTAGGAATGAGATATCTCAAAAAGGGCCCTTGGACATTGAAGATCTCGCTAATCTGGGAAGAACTATGGGAACTTGTCCATACTATGGTTCTAGAAGCATGGTTCGAAGTGCTGATCTTGTGGTCCTACCATATCAATCTCTTCTGTCTAAATCATCTCGCGAAGCACTTGGTCTGAACTTGAAATCCAATATTATTATCATAGATGAGGCTCATAATTTAGCTGATTCACTTATCAACATGTACGATTCCAAAATTACTTTATCACAGCTGCAGACTGTGCACAGCCATGTGGAACAGTACTTTGTGAGATTCCGGAATCTTTTGGGACCTGCTAATAGGAGATATATTCAAACTTTGCTGGTCCTCATGCGAGCTTTTCTCCGAGTACTGCTTGATGATAAAGATGGAAATCTTATAGATTCTTTTTGTGATATAGATCAAGCTTCTGAAGAAAGTAGAGCCTCTCATTTTACTATGGCCATCAACGATTTTTTATTTAAACTAAATATAGACAATATCAACTTGGTCAGATTGTTAAAGTATATAAAGGACAGTAATATCATGCACAAGGTTAGTTGTTATGGAGAAAAGGTGGCTACCTTGGAGAAGATACCAGCACATCATAAAATTGGGGAGCATGCTGAGGAAGGAAGCTGTGTATCTGCTTTCCAGGCCTTAGCTGACATATTGCTATCACTGACAAACAATGATGATGTTGGAAGGATAATAATTTCCAAGTCTAGGTCAACAAGCCTTGTGAAGCAAGGAGGATATATGAAGTATGTTATGCTCAGTGGAGAGAAGATTTTTTCCGAGATTGTAGATGAAGCACATGCTGTTGTATTAGTAGGGGGAACACTCCAACCAATAGAAGAGACAAGGGAGCGACTCTTTCCATGGTTACCACCAAATCAGTTGCATTTCTTTTCATGTGGTCATATTGTCCCTCCAGATAGCATTCTGCCAATTGCAGTTACATGTGGACCTACTGGCCGTTCCTTTGATTTTAGCTTTAGCTCTAGGAGCTCACCAGAGATGATGCGAGAGCTGGGTCTTCTGCTATGTAATTTGGTGACTGTGGTTCCCGAAGGAATTGTAGTCTTCTTCCCTTCTTTTGATTATGAAAATAGAGTCTATGAACATTGGGAGTCATCTGGCATTCTTGAAAGGATTACAAGGAGGAAGCGTGTCTTTAGGGAGCCTAGAAATAACATGGATGTTGAATCTGTTCTCAAGGAATATAAAGATACCATTAATAAATTATTGGATATGAAAGCATCTCATAGTGGTGCAATGCTCCTTGCTGTTGTAGGTGCGAAGCTATCTGAAGGGATCAACTTAAGTGATGGGATGGGCCGATGTATAGTCATGGTTGGACTACCATATGCTAACCCATCTGACATTGAGTTGTTGGAGAGGATAAAGCACATTGAAGGTTTTCAAAATTTGAAGCTTCTTGATAATCCTACTGTTTCTGCCAGTTATGATCTGTACGGTGAAGTACAAGGTGGTTTTGACATCTTACGAAGTTGCAGTCACAGAGGAAAAGAGTATTATGAGAATCTGTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCGATCCGTCACATTAATGACTATGCTGCAATTTTGTTGGTTGACACACGGTATGCATCTGATTCCTCAAAACGGAGCTTATCCCGTCCAATCACGAAACTCCCCCTGTGGATAAAAGATCGTCTTGTTTCTTCTTCCATTAATTATGGGGAGATTAAAACCGTGACTGCCATTGAAGGTGGAGCCCTCTCTTTCACAGAACCACAAATGTTGCTAAGAGAAACCTTTCACAAGACCAAGATTTTCTTTCACAGAAACTTTCGAAATTTCTGGTCTTTCTTATTTGGAGAGTACCAACAGCTTCCCAGATCTCTTTCCTTCAACCCTTTCCTTTGTAGAATTGGCAATGCAAGAACTAAGACTAGCGATCAGTTTTACAATGAGTTTTATGATATGCTGCAGTCTGATCTCGGCAGAATAAGGATGTATGGTGACAGCATTTCCAGGTCAGCAATGGAAGATGCTGCATGTACCGGAAGCTTCACGTACTTTGCCAAGCAAAGTTCACAAAAGAGCATCCATGAGGACAAAGCACAAGATAAGAAGAACAAAGGGAGCTTGCACCTCAGAAAAAAAGAAGACTTGACAAACCCACAAAGCATGAACAAGAAAGCTCGTGTTTTGGCACAAAAGATGAAGACAATGGATATGATGGATGGGGGTGATCTAGAGCATGTATTAGACATAGAAGAGGCACTCCACTATTATTCTCGCCTTAAGAGCCCTGTCTATTTAGATATTGTCGACAAGTTTTTCATGGACATACAATCAGAATTATCTGTTCCGCAGCCCTGTACCAGCTTCAAACCCTCAAACAAAAGACTTGGCCCAATCCGGTTGAGATGA 3296 0.4123 MEGTPKFPGFPFEPYSIQIDFMKSLYESLNEGGVSMLESPTGTGKTMSVICSALQWVLDRRLQQEAACGEDEGNHADDEPDWMRDFVVNKHENNKKEDRRGKPYSNKKINEIPRVMGVGEKSLQNKNKIDAVDISDKEFLLEEYESDDEEGVGPKRKAVKTSFSSSSEDESGEEENKFKVYFCSRTHSQLSQFIKELRKTVFANEMNVVSLGSRKNLCINEEVVALRNSTRINERCLELQKKNINDAKKLKNVKVGPWLPRTKVSSGCPMLRKHRVQQEFRNEISQKGPLDIEDLANLGRTMGTCPYYGSRSMVRSADLVVLPYQSLLSKSSREALGLNLKSNIIIIDEAHNLADSLINMYDSKITLSQLQTVHSHVEQYFVRFRNLLGPANRRYIQTLLVLMRAFLRVLLDDKDGNLIDSFCDIDQASEESRASHFTMAINDFLFKLNIDNINLVRLLKYIKDSNIMHKVSCYGEKVATLEKIPAHHKIGEHAEEGSCVSAFQALADILLSLTNNDDVGRIIISKSRSTSLVKQGGYMKYVMLSGEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSILPIAVTCGPTGRSFDFSFSSRSSPEMMRELGLLLCNLVTVVPEGIVVFFPSFDYENRVYEHWESSGILERITRRKRVFREPRNNMDVESVLKEYKDTINKLLDMKASHSGAMLLAVVGAKLSEGINLSDGMGRCIVMVGLPYANPSDIELLERIKHIEGFQNLKLLDNPTVSASYDLYGEVQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSLSRPITKLPLWIKDRLVSSSINYGEIKTVTAIEGGALSFTEPQMLLRETFHKTKIFFHRNFRNFWSFLFGEYQQLPRSLSFNPFLCRIGNARTKTSDQFYNEFYDMLQSDLGRIRMYGDSISRSAMEDAACTGSFTYFAKQSSQKSIHEDKAQDKKNKGSLHLRKKEDLTNPQSMNKKARVLAQKMKTMDMMDGGDLEHVLDIEEALHYYSRLKSPVYLDIVDKFFMDIQSELSVPQPCTSFKPSNKRLGPIRLR 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00672 1094 SMART deadxpd 6 393 IPR006554 GO:0003678|GO:0016818
Pste6g00672 1094 MobiDBLite consensus disorder prediction 145 171 - -
Pste6g00672 1094 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 4 399 IPR014013 GO:0005524
Pste6g00672 1094 Pfam Helicase C-terminal domain 634 844 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Pste6g00672 1094 Gene3D - 156 404 IPR027417 -
Pste6g00672 1094 MobiDBLite consensus disorder prediction 985 1012 - -
Pste6g00672 1094 Gene3D - 612 847 IPR027417 -
Pste6g00672 1094 SMART ultradead3 10 428 IPR014001 -
Pste6g00672 1094 Gene3D - 11 73 IPR027417 -
Pste6g00672 1094 SMART Cxpdneu3 652 833 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Pste6g00672 1094 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 10 858 IPR045028 -
Pste6g00672 1094 NCBIfam DNA repair helicase (rad3) 137 863 IPR013020 GO:0003678
Pste6g00672 1094 MobiDBLite consensus disorder prediction 985 1015 - -
Pste6g00672 1094 Pfam DEAD_2 182 370 IPR010614 GO:0003677|GO:0003678|GO:0005524
Pste6g00672 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 365 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00672 Pste-Chr6 2526739 2535208 Dispersed