Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00669 TGAGGTTGAAGTTTTCTCTTTTGTTTCCATCTCACAAGAATGGGAAGGTGAATAAAGTTGCCATCTTAAACTCGATACATAAAGAGACTATTACATTTTGGGTTTGCCAAACAGAAGAGAAAGTTGGGTAGCTCAATAGCTGGTTCCATTTTCAAGATTTATAGAGCAAAGGAGAAAGCTAGAATAGCTTATTCCATTTGAAAGTGATACGACTCGTGTAAGCAATAGGGACTACCTGGTTTAAGTTCAGAGGTTTCAAATCTCACGCTGAGGGTTGTTTGAGGAATGAGAGCAGAAGATAATGGATTTCTGGCCAGAATTTCTTGCAACCAGTTCGGGAAGAGAGTTTGTAGCAGGTGGCTTTGGAGGCATTGCTGGTATAATTTCTGGTTATCCACTAGACACTCTCCGCATCAGATTACAAAACTCAAAAAATGGCTCTGCGTTTACAATCCTTAGACAAATGGTGTCTAGGGAAGGACCAACTTCTTTGTACCGTGGCATGGGCACACCATTAGCCTCTGTTACTTTTCAGAATGCAATGGTTTTCCAAACGTACGCAGTTCTATCAAGGGCATTTGACTCATCAGTTTCTGCTAAAGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGAGGAACTGGTACTGGGGCTCTCCAAAGTCTATTACTATCCCCTGTAGAATTGATCAAAATTCGACTTCAGCTACAGGACGCAGGCCAGATGACCGAATCCGCAAAAGGTCCTGTAAGGCTTGCTAAAAACATATGGAGAAAAGAAGGTCTTCGTGGCATCTATCGAGGATTTGGTGTCACAATGATGAGGGATGGACCTTCTCATGGTTTATACTTCTGGACATATGAATACATGAGGGAACGATTTCACCCAGGTTGCAGAAAAAGTGGTGAAGAAAGCTTACATACTATGTTAATAGCAGGAGGATTAGCTGGGGTGGCTAGTTGGATTAGTTGCTACCCTTTTGATGTTGTAAAGACAAGACTACAGGCTCAAACACCCTCTTCTCTCAAGTACAAAGGAATTATAGATTGCTTCAAAAAGAGTGTTAACGAAGAAGGATACGGTGTGCTATGGCGGGGTTTAGGAACTACAGTTGCCAGAGCTTTCCTAGTAAATGGTGCTATATTCTCTGCTTACGAGATTACACTAAGATTACTATTTAACAATAGAAGTATTCAAATGCAGGAAACAATTTAGGAGAAACACCATTCCCAATACCAGGTGTGCTGAAAACAATTATATTTCAGCTTTGATATATTTCAATAACCATTACAACTTACAAGATGTAATTCCAGATATTCTATACGTAATATTCATTACAT 1338 0.4028 MDFWPEFLATSSGREFVAGGFGGIAGIISGYPLDTLRIRLQNSKNGSAFTILRQMVSREGPTSLYRGMGTPLASVTFQNAMVFQTYAVLSRAFDSSVSAKDPPSYKGVALGGTGTGALQSLLLSPVELIKIRLQLQDAGQMTESAKGPVRLAKNIWRKEGLRGIYRGFGVTMMRDGPSHGLYFWTYEYMRERFHPGCRKSGEESLHTMLIAGGLAGVASWISCYPFDVVKTRLQAQTPSSLKYKGIIDCFKKSVNEEGYGVLWRGLGTTVARAFLVNGAIFSAYEITLRLLFNNRSIQMQETI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00669 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Pste6g00669 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 12 291 - -
Pste6g00669 303 Gene3D Mitochondrial carrier domain 13 302 IPR023395 -
Pste6g00669 303 FunFam Mitochondrial arginine transporter BAC2 11 301 - -
Pste6g00669 303 Pfam Mitochondrial carrier protein 12 93 IPR018108 -
Pste6g00669 303 Pfam Mitochondrial carrier protein 205 294 IPR018108 -
Pste6g00669 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Pste6g00669 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Pste6g00669 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Pste6g00669 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Pste6g00669 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Pste6g00669 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Pste6g00669 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Pste6g00669 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Pste6g00669 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00669 Pste-Chr6 2511348 2514116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00669 1 294 Antiporters AT1G79900 71.525 2.36e-147 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00669 6 2511348 2514116 Pste6g00669 6 2511348 2514116 ECH