Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00650 GTAAAGTCAACCAACTAATTCTCTGAATAGTCAAGTGGCTCCATTAACAAAGTGAACAAAGTTTCACTTTTTTTCTTGTACTTTTGCTTTATGATTCTTCTATTCCTACCCCAAAATCATTTTAAGTTGAAAAGTTTCTGAAATCTTGGCTACCCATTGCACAATCACTAGCATCAGCCAAAAATTCTATGTCTTGTTCACTTTATCCTGTTTGGATATTTGCTTTTGCTTTTTCATTTGGGGTTGCAAACTTTGGCTCACTCTAAGATTTTTGAGCTTGTTTGTTTGTATCTTAAGATATAACCCAAAACCTTTTAGTTTTAGGGTGTTTTTTGTTGATGGGTGCTTGTTGGAGCAGTAGGGTTAAGGCTGTGAGTCCTTCCAGTACAGGGTTCACATCCAGATCTGTGAGCAGAAATAGCTATGATATTCACTCAAGTAGCATAAACTCATCATCCTCCATGCCCTTGACCCCTCGGAGTGAGGGCGAGATCTTACAATCTTCCAATTTGAAACGCTACAGCTTCAATGAGCTAAAAATGGCCACAAAAAATTTCTCCCCAGACAGTGTCTTAGGAGAGGGTGGATTTGGTTCAGTTTATAAGGGCTGGATTGATGAACATACACTTGCTGTTACTAAACCTGGAACAGGCATGGTTGTTGCTGTCAAAAGACTTAACCAAGAGGGGTTCCAGGGTCATAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTAAAGTTGATAGGCTACTGCTTAGAGGATCAAGACCGGCTTCTGGTTTATGAATATATGCCAAAAGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCAGCTTACTTGGACTTTGAGATTGAAAATATCCCTTGGGGCTGCAAGGGGTCTTGCTTTTCTCCATGGTTCAGAAACTAAAGTCATATACCGTGACTTTAAGACTTCCAACATCTTGCTTGATACTAACCATAATGCCAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCTACTAGGATCATGGGAACCCAGGGATATGCAGCACCAGAGTATCTAGCAACAGGAAGACGTGCCATTGACAAGAACCGGCCATCCGGTGAACAATGCTTAGTTGAATGGGCAAAGCCATACCTTGCTAACAAACGGCGAGTTTTTCGTGTAATGGATAGCCGTCTTGAAGGCCAGTATTCCCTCAACCAAGCTCAAAGGGCAGCCAGCCTTGCTTTTCAATGTCTTTCTGTGGAGCCAAAATACAGGCCTAAAATGGATGAGGTGGTGAAAGTATTGGAGCAGCTTCAAGAATTGAATGATCAAGTGAAAAATGGTGATCATAAAAACAGAAGGGTAAGTGGCTCTGGCCTTAGCCATCCCAATGGGCTTCCTGCATCTGCTAGCAAAGGAAGTGCATATTCTCCTAAAAAGTTTGCTTATCCTAGGCCTTCTGCTTCTCTTCTTTATGCT 1514 0.4194 MGACWSSRVKAVSPSSTGFTSRSVSRNSYDIHSSSINSSSSMPLTPRSEGEILQSSNLKRYSFNELKMATKNFSPDSVLGEGGFGSVYKGWIDEHTLAVTKPGTGMVVAVKRLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQDRLLVYEYMPKGSVENHLFRRGSHFQQLTWTLRLKISLGAARGLAFLHGSETKVIYRDFKTSNILLDTNHNAKLSDFGLARDGPTGDKSHVSTRIMGTQGYAAPEYLATGRRAIDKNRPSGEQCLVEWAKPYLANKRRVFRVMDSRLEGQYSLNQAQRAASLAFQCLSVEPKYRPKMDEVVKVLEQLQELNDQVKNGDHKNRRVSGSGLSHPNGLPASASKGSAYSPKKFAYPRPSASLLYA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00650 392 FunFam Os07g0541700 protein 159 248 - -
Pste6g00650 392 ProSiteProfiles Protein kinase domain profile. 73 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00650 392 Pfam Protein tyrosine and serine/threonine kinase 77 333 IPR001245 GO:0004672|GO:0006468
Pste6g00650 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pste6g00650 392 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Pste6g00650 392 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pste6g00650 392 Gene3D Transferase(Phosphotransferase) domain 1 159 258 - -
Pste6g00650 392 Gene3D Transferase(Phosphotransferase) domain 1 259 358 - -
Pste6g00650 392 MobiDBLite consensus disorder prediction 342 377 - -
Pste6g00650 392 MobiDBLite consensus disorder prediction 356 370 - -
Pste6g00650 392 SUPERFAMILY Protein kinase-like (PK-like) 42 334 IPR011009 -
Pste6g00650 392 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pste6g00650 392 PANTHER OS01G0588500 PROTEIN-RELATED 39 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00650 Pste-Chr6 2440095 2444617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00650 51 334 Glycoside Hydrolase AT3G07070 45.752 4.45e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste6g00650 PK_Tyr_Ser-Thr 2.4e-35 CL0016