Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00649 GAAGGATGAGAGAGAAAGTTAGCTAAAGAAGGAGCTCTAAATTCCATTTGAAGATCGTTGTAGGGTTTTTAACCTTATCTCATCAAATATCTAGACCACAACACTGTTCATTTCTCTTTTGTCTTGTACTCCAATTTTTTCAAGAGTGGCATAAGAGTTGAAAAATATAGAAGATGGGAGAAAGTCGTGTCTCCCTCTCTTCCAAGACAAACCCTTCTAATGATGATGAAGAGTGTGAAAGTGAGGCCAATGAAGATCAAAGTAAGCAAAACAACAATGGAGGAAGCTCAAGTAATAGCACAGTGGAAGAGAGTGAGAAGAAGATAAGGCCTTATGTTAGATCCAAGTTGCCAAGGCTTCGGTGGACACCTGATCTTCATCTTCGTTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAATTGATGAACATCAAAGGTTTGAGTATTGCCCATGTCAAGAGTCATTTACAGATGTTTAGGAGCAAAAAGGTGGATGACAGAAATCAAGCAGTCTTTGGGCATCATAATGGTCTTGTTGAAATTGGAGACAAAAATGTTTATAATCTTAGCCAACTTTCAATGCTTCAAGGGTATAATCCAAGTCAAAGTTCATCCTTCAGCTTAACAAACAATTATCCAAGATATGGATTCGGGGATGCTTTATTTGGTACCTACGAAAAGCTGCTACAAAGGCCTTTCGATTGGTCCAATGGAACTTCTCGTGCAGGTTCATCCATTTGTGGTGAACAATCAACAAGTAAAGTCCGTGAACCAAAAAATGAGTTTCTCTCATTTGGTGCTTATAATAATAACTCTCTATGCACAAGCACAAGACTAGGCCACGTTGATCAAACCCCATCAATGATCAATATTATGCAACAAAGAGCGCAGAATCTCATACCCATAAACCCAACAACAAATCCACCAGAATTGAAGACACTGAAAAGAAAGGCTCCAGATACAACAACCCTTGATTTGGATCTGTCACTAAAACTAAACTCAAAGGTGGAAGGTGAAGGAACATTATTGGAGGATCATTATGAAGTTGATAGCAACCTATCACTCTCATTGTGCTCTCAATCATCATCTTCCAATCCTATTAACAAGTTGAAGGAAAATCAAGCTCTATGTGAGGAACATGGGAAAAGGGCCAGTACTCTAGATCTGACTATATGAATGAGACAAATTCTCAGTGAGATCTTGAGGTACTTGTCAGCTACTATGCTTTTTATTATAACCAAATTCTTACATTTATCTGACTTAATTAGATATTTTTCTTTCGTGTTTCTTTCAGTATGTACTGTCAAATACATATGAACTAGATAGATGAATCATGATTTTAATTGCAGTCATATTGCCTTTATATTACTTTCATAAATGCCAAAAAAGAGAAAATTTAGTTACAAAAAACTAGAGGTAAACATGCAATTAAGAAAAGGATAAAAAAAAATCTAGTTTTTATCACCACAACCACAAGTTAGACCAATGATTTTGCG 1525 0.3659 MGESRVSLSSKTNPSNDDEECESEANEDQSKQNNNGGSSSNSTVEESEKKIRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKVDDRNQAVFGHHNGLVEIGDKNVYNLSQLSMLQGYNPSQSSSFSLTNNYPRYGFGDALFGTYEKLLQRPFDWSNGTSRAGSSICGEQSTSKVREPKNEFLSFGAYNNNSLCTSTRLGHVDQTPSMINIMQQRAQNLIPINPTTNPPELKTLKRKAPDTTTLDLDLSLKLNSKVEGEGTLLEDHYEVDSNLSLSLCSQSSSSNPINKLKENQALCEEHGKRASTLDLTI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00649 343 Pfam Myb-like DNA-binding domain 62 110 IPR001005 -
Pste6g00649 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 116 IPR017930 -
Pste6g00649 343 MobiDBLite consensus disorder prediction 1 52 - -
Pste6g00649 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 60 115 IPR006447 GO:0003677
Pste6g00649 343 FunFam Myb family transcription factor 58 116 - -
Pste6g00649 343 SUPERFAMILY Homeodomain-like 59 114 IPR009057 -
Pste6g00649 343 MobiDBLite consensus disorder prediction 28 44 - -
Pste6g00649 343 Gene3D - 59 116 - -
Pste6g00649 343 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 25 232 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00649 Pste-Chr6 2433173 2435368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00649 24 193 G2-like Transcription Factor Family AT2G42660 42.857 9.30e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste6g00649 Myb_DNA-binding 8.5e-07 CL0123