Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00648 GAAAAAGAATAATGTCAAAGAAGGTGAGAAAATCACTGGGAGAGTATATCTCGCAGATGAAAACTCCCAGGCCTCGAATCCGGTTACCATCTAAGAAATGGGTGATGCCAGGGTGCAGGCATGTTAGGACCACTTCTCTAGACAAGGGGAAGGGGAAGGGACAGGGGCAAGGGCAAGGGCAAGGGCAAGGCAACAACAACATCAAAGACGACGAAGCCATGTTGGCCGACATCGACCGTTTCCTCTTCGAGAATTTCAAGTCTCTGTTCCTCGAAGACCGTGACGATTCTCCCAACTCTTCCCATCTCCGCCTTGGCCCCATCAGGTTCGACGACCAATCGCCGCATAACCTCTTCACCGACACCACCTCCGAACCCCGATCCAGCTCCGCCACCTCCGAATCCGACCAGACGCCGCTTCCCTCCGACTGCATCGTCCTGCTCTCCAACTCCGACTGCCCCGCCCAGGATTTCCGCCGATCCATCCACAGCCTCGTCGAAGCAAGATTGAGCAAGTGCGGAAAGGTGGATTGGGAGTTCATGCAGGAGGTTTTGTTCTGTCACATGAACCTCAACCAGAAACAGTCGCACAAGTTCATTCTGAGCGCCTTCGTAGACGTCGTCAACGCCATGCGCGACCCACCCGATACTACGCCGCTGCCGGTGATGCCTCCGCGAAGCGTTCGGACTGTAAGGATCGGAAGGGAGGTGCGCAAGAAGACAAAGGCAGCACTCACCTTCGACTTTGGGTCCCCCTAAATTATTCTTCCCTATACCAGACCAGGTTTCGGTCTTCATCGTAATAATAATTGTTTATGGTAATAAAAAACTTTATTAGATGTATATTTAATAGAATTTCTTTTTCTGCTTACCCTCATTTTAACATGACAATC 892 0.5123 MSKKVRKSLGEYISQMKTPRPRIRLPSKKWVMPGCRHVRTTSLDKGKGKGQGQGQGQGQGNNNIKDDEAMLADIDRFLFENFKSLFLEDRDDSPNSSHLRLGPIRFDDQSPHNLFTDTTSEPRSSSATSESDQTPLPSDCIVLLSNSDCPAQDFRRSIHSLVEARLSKCGKVDWEFMQEVLFCHMNLNQKQSHKFILSAFVDVVNAMRDPPDTTPLPVMPPRSVRTVRIGREVRKKTKAALTFDFGSP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00648 248 MobiDBLite consensus disorder prediction 46 64 - -
Pste6g00648 248 MobiDBLite consensus disorder prediction 90 135 - -
Pste6g00648 248 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 113 207 IPR038933 GO:0045892
Pste6g00648 248 MobiDBLite consensus disorder prediction 40 64 - -
Pste6g00648 248 NCBIfam uncharacterized plant-specific domain TIGR01568 143 207 IPR006458 -
Pste6g00648 248 MobiDBLite consensus disorder prediction 111 135 - -
Pste6g00648 248 Pfam Transcriptional repressor, ovate 150 206 IPR006458 -
Pste6g00648 248 ProSiteProfiles OVATE domain profile. 143 206 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00648 Pste-Chr6 2433001 2433965 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste6g00648 Ovate 1.6e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00648 6 2433001 2433965 Pste6g00648 6 2433001 2433965 ECH
Pste3g03656 3 28823514 28824095 Pste6g00648 6 2433001 2433965 PCT