Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00643 ATGACAATGAATCCACCACACCTGATGAAATTTTCTGGTTCCAGAAATGAGATTCGGTTGGGAAATCAATCTCTGCCAATTCTTGGGAATCAGAGATTTGATAATGGACACAGATTTGAAAATCTCTTCTTTGATGAAAGTAGGGAAAAAATTGATTATCTACAATCTGATCCAAATCCAATACCAGCTAACACACCTTCATCCTCCAGTGTGACCCATGAGGAACACTCTCCAGAGGACTGTGAATTTTCTGATGCAATTTTGAGTTACATTAGCCAGATCCTTATGGAGGAAGACATGGAGGACAAGACATGCATGCTTCAAGATTCTTTAGATTTTCAAGCAGCAGAGAAATCTTTCTATGAGGTTCTTGGGGAAAAGTACCCACCTTCTCCAAGAAATCCCAGCCTTATTGATGATGGGTTTGGAGGTTATGATTTTTCTGGAGATTATGGTAATTGTCCTAATACTAATGGGGATTTCATAAGCAATTGTACTAACTCATGTAACTTTCCTGAACATAGTCTTCATGGTAATAGCATTTCACATTCATCTTATAATAACCCTTCTAATGGTGTAATAGAAGAGCTGGTAGATTCTCCAAATAGTATTGTCAAGGTTCTTGATATGAACAGTGAAAGTCAATCCATTTGGCAATTTCAGAAAAGTGTTGAGGAGGCTAGTAAGTTTCTTCCTAGTGCAAATGGGCTGTTTGTTAATTTGTCCCAACCAAAGCCAAAAGTAGAAAAGAATGAATTATTATTTAATATGGAGAAGGAGGAGGGGGAATGTGTTCATGGTGGATCCAAGGGAAGGAAGCATCCTCAGATGGATGAAGCAGATATTGAAGAAAACAGAAGCAGAAAGCATGCAGCAATTTATTCTGAACCAACATTGCGGTCAGATATGGCTGATATGATCCTGCTTCATAGCACTGGGGATGGTAAAGAGCACTTTGTTGCTCGCCGCGAGGCTTTACAGAATAAGATACAGAAGGAAGTGTCGCCAAAAGGTCAATCAAAAGCATCCGGCAGTGGGAAGGGGCGTGGTAAGAAACAACGTGGGAGGAAAGAAGTGGTGGATTTGAGAACACTTCTTGTTCTATGTGCACAAGCTGTTGCTGCAGATGACCATAGGAATGCCAATGAGTTGTTAAAGCAGATCAGGCAACACTCAACCCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCAGATGGCCTTGTGGCGCGTTTGGCTGGTACTGGCAGCCAAATTTACAAAGGACTTGTTGGCAAAAGAACATCATCTGCTGATTATCTAAAAGCTTATCATCTATACCTTGCTGCATGCCCCTTTAGGAAAATTTCTCACTTTACCTCAAATGTCACAATAAGGGAATCTTCAGCACAATCAATGAAGGTCCATGTTATAGATTTTGGCATCCTTTATGGTTTCCAATGGCCTACTTTTATACAGAGGCTTTCATGGAGAACAGGAGGGCCACCAAAGCTACGGATCACTGGCATAGACTTCCCACAACCTGGTTTCAGGCCAGAAGAAAGAGTTATAGAAACGGGACGCCGCTTGGCAGCTTATGCTGAAGCCTTTAATGTTCCATTTGAGTACAAAGCCATAGCAAAAAAATGGGACACAATTCAACTTGAGGAACTTGAGATTGATAGGGATGAGTTCCTTGTTGTTACTTGTTTCTATAGAGGTAAGAACTTGCTGGATGAATCTGTTGTAGTGAACAGTCCAAGGAATAATTTCCTCAGCCTGATTAGGAAGATCAACCCAAAGTTGTTCATTCATGGAATCACAAATGGGGCCTTTAATGCCCCTTTCTTTGTTACCAGATTCAGGGAGGCATTGTTTCACTACTCCTCACTGTTTGATATGCTTGAGACTATTGTGCCTCGTGAGGACTGGGAGAGGATGCTGATAGAGAAAGAAATATTCGGAAGGGAAGCATTGAATGTCATAGCCTGTGAAGGGTCTGAAAGAGTGGAGAGGCCAGAGAGCTATAAGCAGTGGCAAGCACACATTCTACGAGCCGGGTTTGTGCAACAATCTTTTGCTCGTGAGACCGTGAAGATGGCAATGGAGAAAGTGAGAGGTAGCTACCACAAGGATTTTGTGATTGATGAGGATAGCCAGTGGTTGTTGCAAGAACTATCCTTTGATGTTGTTGCTCATTTTGAGGAATCTATCTTGATGCTTTTTCTGGTTTACCTATTATTTGTTGTTGCTGTTTCATACCCCTTTGTACCTCTTGAAATGTCAAATCACCTATCAATGAGAGAGAATAAAGTTGAGTGCACTGAAGATTGCAACTAG 2325 0.4138 MTMNPPHLMKFSGSRNEIRLGNQSLPILGNQRFDNGHRFENLFFDESREKIDYLQSDPNPIPANTPSSSSVTHEEHSPEDCEFSDAILSYISQILMEEDMEDKTCMLQDSLDFQAAEKSFYEVLGEKYPPSPRNPSLIDDGFGGYDFSGDYGNCPNTNGDFISNCTNSCNFPEHSLHGNSISHSSYNNPSNGVIEELVDSPNSIVKVLDMNSESQSIWQFQKSVEEASKFLPSANGLFVNLSQPKPKVEKNELLFNMEKEEGECVHGGSKGRKHPQMDEADIEENRSRKHAAIYSEPTLRSDMADMILLHSTGDGKEHFVARREALQNKIQKEVSPKGQSKASGSGKGRGKKQRGRKEVVDLRTLLVLCAQAVAADDHRNANELLKQIRQHSTPFGDGNQRLAHIFADGLVARLAGTGSQIYKGLVGKRTSSADYLKAYHLYLAACPFRKISHFTSNVTIRESSAQSMKVHVIDFGILYGFQWPTFIQRLSWRTGGPPKLRITGIDFPQPGFRPEERVIETGRRLAAYAEAFNVPFEYKAIAKKWDTIQLEELEIDRDEFLVVTCFYRGKNLLDESVVVNSPRNNFLSLIRKINPKLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGSERVERPESYKQWQAHILRAGFVQQSFARETVKMAMEKVRGSYHKDFVIDEDSQWLLQELSFDVVAHFEESILMLFLVYLLFVVAVSYPFVPLEMSNHLSMRENKVECTEDCN 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00643 774 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 285 705 IPR005202 -
Pste6g00643 774 ProSiteProfiles GRAS family profile. 353 741 IPR005202 -
Pste6g00643 774 MobiDBLite consensus disorder prediction 264 296 - -
Pste6g00643 774 MobiDBLite consensus disorder prediction 264 295 - -
Pste6g00643 774 MobiDBLite consensus disorder prediction 328 356 - -
Pste6g00643 774 Pfam GRAS domain family 362 718 IPR005202 -
Pste6g00643 774 MobiDBLite consensus disorder prediction 58 72 - -
Pste6g00643 774 MobiDBLite consensus disorder prediction 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00643 Pste-Chr6 2404395 2407255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00643 79 719 GRAS Transcription Factor Family AT2G37650 53.720 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g00643 GRAS 2e-106 CL0063