Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00641 TTACTTGAAGATGATTGTGATAATATAGCAGAAGTGATTAATGAGAAAGTGGTTGGAGAAGAGAAGTCCGAATATTCCAATAACATTAACGGCAAGGGCACGCAAGGAGTTGATGCCTCCCTCTATAAATTGAAAGACAGCCTAAGTCTGTTGTTAAGAGTAAACCGAGCAAACACAATAAATATTATGGGTGTTAACTCCAACAGAGTGGAGCACCTAGCTTGCAATAATGGCAATGGCAGCAGCATTAAGATCCAAACAGAGATACAATTACAAATGCCAACCTTGGAAATCCATAAGGTTCAGTTGCCACCAGAACGCACCACCTTGCAAAAACTCAGGCACACACTCTCTGAGATCTTCTTCCCAGATGATCCACTCCACAGGTTCAAGAACCAAACATGCCTCATGAAGCTCCTCCTTGCACTTCAATACTTATTCCCCATTTTCCAATGGGCCCCTCACTACAACCTCTCCCTTCTCCGCTCTGACGTCATCTCTGGTCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACTTGCCACCTATTCTTGGATTATATTCCAGTTTTGTGCCTCCTTTGATATATTCGCTTCTTGGAAGTTCTAGACATCTGGGTGTTGGCCCCGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAACTGAGACGGTTTCTTATAGTCAAGATCCAATTCTGTATCTTAAGATGGCTTTCACTGCCACTTTTTTTGCTGGTTTATTCCAATCTTCTCTGGGTATATTAAGGTTAGGATTCATAATTGATTTTCTCTCAAAGCCAACGCTGGTGGGTTTCATGGCTGGTGCAGCGATTATTGTGTCACTGCAGCAGCTAAAAGGGTTGCTTGGAATAGTTCATTTCACCACCAAGATGCAAATAACACCTGTTCTCATCTCTGTTTTCAAACAGAGACACGAGTGGTCATGGCAAAACCTTGTGCTGGGATTCAGTTTTCTGCTATTCCTGTTGACAACAAGGCACATTAGCATGAAGAAGCCAAAATTATTCTGGGTTTCAGCAGCTGCCCCGTTGACATCAGTCATTCTGTCAACCATTTTAGTATTCTTTCTCAGAAATAAAACCCATAAAATTGCTATTATTGGTGAATTGCCAAAGGGACTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTATCAAAACAGGACTTGTCACTGGGATCTTGTCTCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAGGTGGATGGAAATAAAGAAATGATGGCCATTGGATCCTTTTCTCGATCAGCTGTTAACTACAATGCCGGCGCACGGACTGCAGTTTCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTCATGCCACTGTTCTATTATACACCGAATGTAGTCTTAGCGGCCATTATCATCACTGCTGTTATAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTTGGTGTTCTGTTCATTTCAGTCCCTTTAGGCCTTGGGATAGCGGTGGCAATATCAGTCTTCAAGATCTTGCTTCATGTATCTAGGCCAAACACACTGGTTTTGGGGAATATACCAGGGACGCCAATATTCCACAACCTATACCAATATAGAGAAGCTTTGAGGATTCCTTCGTTTATCATTTTAGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTTCAAGAAAGGATACTGAGATGGGTTCGAGAAGAAGAAGAGCGAGTAAAAGCAAACAATGAAAGCACGTTGAAGTGCATAATTTTGGACATGACAGCTGTAACAGCCATAGACACAAGTGGAATCGATACTCTATGTGAACTCAGAAAGGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATCAGTCAAACATTTTGGATTCCTTTGGGTTGAAAGGAGTATATCTCACAGTAGGAGAAGCTGTAGCTGACATTTCATCTTCGTGGAAAGCTCAGCCT 2121 0.4191 LLEDDCDNIAEVINEKVVGEEKSEYSNNINGKGTQGVDASLYKLKDSLSLLLRVNRANTINIMGVNSNRVEHLACNNGNGSSIKIQTEIQLQMPTLEIHKVQLPPERTTLQKLRHTLSEIFFPDDPLHRFKNQTCLMKLLLALQYLFPIFQWAPHYNLSLLRSDVISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLTETVSYSQDPILYLKMAFTATFFAGLFQSSLGILRLGFIIDFLSKPTLVGFMAGAAIIVSLQQLKGLLGIVHFTTKMQITPVLISVFKQRHEWSWQNLVLGFSFLLFLLTTRHISMKKPKLFWVSAAAPLTSVILSTILVFFLRNKTHKIAIIGELPKGLNPPSSNMLYFNGPYLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGSFSRSAVNYNAGARTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTPIFHNLYQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLCELRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKGVYLTVGEAVADISSSWKAQP 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00641 707 CDD STAS_SulP_like_sulfate_transporter 577 692 - -
Pste6g00641 707 FunFam Sulfate transporter 31 556 702 - -
Pste6g00641 707 Gene3D STAS domain 556 701 IPR036513 -
Pste6g00641 707 ProSiteProfiles STAS domain profile. 576 699 IPR002645 -
Pste6g00641 707 Pfam STAS domain 577 695 IPR002645 -
Pste6g00641 707 SUPERFAMILY SpoIIaa-like 582 698 IPR036513 -
Pste6g00641 707 ProSitePatterns SLC26A transporters signature. 190 211 IPR018045 GO:0008271|GO:0008272
Pste6g00641 707 NCBIfam sulfate permease 148 695 IPR001902 GO:0016020|GO:0055085
Pste6g00641 707 Pfam Sulfate permease family 161 524 IPR011547 GO:0016020
Pste6g00641 707 PANTHER SULFATE TRANSPORTER 111 699 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00641 Pste-Chr6 2397694 2401573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00641 63 707 Inorganic Solute Cotransporters AT3G15990 72.590 0.0 984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00641 6 2397694 2401573 Pste6g00641 6 2397694 2401573 ECH
Pste3g03660 3 28854255 28859225 Pste6g00641 6 2397694 2401573 PCT