Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00634 ATGATGCACCCTGTGATTATCGAAACTTTTGATCGTGAATTTGAACGCTATGGCTTCAATGTTGATGCTCATGCGGGTGTTTCAGGATTCAATTCCCTGTTCAACACCTCAACTGAAGATTCCTTAAACACTTTACCTTCCATCATGTACACCAATGATAATTTTTTACACTACCCAATTGAAAAAGACACTCTTCAACTCCCATCATTTATGCATGTCTATGATTTGTCTATGGATTATGATGATTTTGATCTCATCCTAAGGGGTCACCAAGAAAGTGAGGGGTATTGGAGTCCTACTCCATCTTTGAATACTTATTTATCATCAAATCAAAGACCACTTACCTTGCCTCAACAAGGCATGCAAATTGAAAACCATGTGAGTCTTCCACATATGTTGGAGGCTCTTGGAGAAGCCATATATCATGGGAACAAATCACTAGCAAAAGTGATTTGGGGATGCATGAGACAGAAAGTTAGTCCAGTTGCTGAACCTCTTGAGCGTCTTGCATTCTATTTGTGCCAAGACTTGGAAGCAAGTCAAGGGGGTTGTTATCTCACACAAGAGGCCTCCAAGAACTTTGATGCAGCTTTTAAGGCTTTCTGCCAAGGCCTTCCACATGGAAAATTTGCTCACTTTGTGGCTAATTTGGCAATTATTGAGGCCCTGCCACATGACTCTGAAGTCATACATATAGTGGATTTTGATATGGGAGAAGGATCTCAATGGCCTCCATTGTTTGAGAATATTGCAACCATTCACAAAACATTGAGGTTGACATCAATCAAATGGGAAGAGGAAGGTTCTGAGGGTGGTGTCTCCTCTCCATGGAAGTTTGAGGAAATTAGAAGGGAACTCTATGAGCATGCTAGATCTTGTGGGTTGAAGTTGATGGTGGAGGAAAGGGGAATGAAAGAAGTGGTTAATGAGCTTAAAAAAATGAACAAAAGGGGTGGAAGGAGAGAATTTTTGGCCTTTAATTGCATGGTGGATCTTCCACATATGGGGAGAGGGAGGAGTAGAAGTCATGTCATGGAGTTTCTAAATTTGATCAAGAGTTGTGACAAAAAAGGAATTGTCACTTTTGGAGATGGGAAAGCTTATGAAAAGATGGAAAATGACTTGGAATTCAGGTCATTCTTTGAGAGGCATTTGGAGCATTACAAGGCCTTGTTAGAGTCAATTGAATCACATTTCCCAAACCATTTCTCAGATGCAAGAACTGCCATGGAGTGCCTATTTGTGGCACCTCATATCTCTTCTCTTGCTTGGTTGAAAAAGTGGGAGGAGATCAGAGATGAGTCCCATTTTCAGGCACAGATTGACTTAGATGGTTACAAATTGAGCAATGCAATTTTAATGGAAGTTAGAGAGATGTTGATTGGATGTGAAGAAGGATCATATCAGGTTAGAATTGAAGGACATAATGACAATCAATTGATTTTAGAATGGAAAGGAAGCCAGATGGTAAGAGTTTCAATTTGGGGAAATTAA 1494 0.4009 MMHPVIIETFDREFERYGFNVDAHAGVSGFNSLFNTSTEDSLNTLPSIMYTNDNFLHYPIEKDTLQLPSFMHVYDLSMDYDDFDLILRGHQESEGYWSPTPSLNTYLSSNQRPLTLPQQGMQIENHVSLPHMLEALGEAIYHGNKSLAKVIWGCMRQKVSPVAEPLERLAFYLCQDLEASQGGCYLTQEASKNFDAAFKAFCQGLPHGKFAHFVANLAIIEALPHDSEVIHIVDFDMGEGSQWPPLFENIATIHKTLRLTSIKWEEEGSEGGVSSPWKFEEIRRELYEHARSCGLKLMVEERGMKEVVNELKKMNKRGGRREFLAFNCMVDLPHMGRGRSRSHVMEFLNLIKSCDKKGIVTFGDGKAYEKMENDLEFRSFFERHLEHYKALLESIESHFPNHFSDARTAMECLFVAPHISSLAWLKKWEEIRDESHFQAQIDLDGYKLSNAILMEVREMLIGCEEGSYQVRIEGHNDNQLILEWKGSQMVRVSIWGN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00634 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 485 IPR005202 -
Pste6g00634 497 ProSiteProfiles GRAS family profile. 120 496 IPR005202 -
Pste6g00634 497 Pfam GRAS domain family 131 495 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00634 Pste-Chr6 2366550 2368043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00634 155 495 GRAS Transcription Factor Family AT5G66770 25.210 3.45e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g00634 GRAS 9.1e-43 CL0063