Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00607 CACATTCTTACACAGAGGAACTTCTCTAAGGAGCAGGATCCTCAAACATGGCTAGAGGGTTGAAGAAACACTTGAAGAGGTTCAATGCTCCTAAACATTGGATGCTTGACAAGCTTGGTGATGCCTTTGCACCCAAGCCATCATCTGGACCCCACAAGTCAAGGGAATGTCTGCCTTTAATCCTCATCCTTAGAAATAGACTAAAGTATGCTCTAACATATAGAGAAGTTATTGCTATCTTAATGCAACGCCATGTATTTGTAGATGGCAGGACTGACAAGACATATCCTGCTGGTTTCATGGATGTTGTTTCTATTCCCAAAACAAATGAAAGTTTCCGTCTTCTGTAA 350 0.4143 MARGLKKHLKRFNAPKHWMLDKLGDAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVFVDGRTDKTYPAGFMDVVSIPKTNESFRLL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00607 100 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 2 100 IPR000876 GO:0003735|GO:0005840|GO:0006412
Pste6g00607 100 FunFam 40S ribosomal protein S4 1 100 - -
Pste6g00607 100 Pfam RS4NT (NUC023) domain 3 39 IPR013843 -
Pste6g00607 100 ProSitePatterns Ribosomal protein S4e signature. 8 22 IPR018199 -
Pste6g00607 100 CDD S4 51 92 - -
Pste6g00607 100 Gene3D - 1 100 IPR036986 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00607 Pste-Chr6 2273639 2275500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00607 1 100 Cytoplasmic Ribosomal Protein Gene Family AT2G17360 90.196 2.25e-64 191