Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00597 TAAGCTGCTCCCAAGAAAGGCTTCAAATTCTCTCTCTCTCTCTCTGTCTGTGAGCTCCTATCTCTCTTCAATGGAGTTGGTGGAGCTTGCAAGATAGACCCAGGATTGAAACACCAAGATCGTATTTCTTCCTGCTGCCGTTGCTGTTCAGAATAATTGCAGAAATGAAGAAGGAAAACAGTGTAACGCTGAAAGCAAGGGAGCGCCCAGGTCGATTGACTCGTGCTCGAGCAGCTGCTGCCCTTCGTACATCTGGGCAACAAAATCAGAATCAGCTATCCAGAGTCAATTCAAAAACAACAGTTTCTGATACTTCATGCCTTCAGCGTAAAAAGAGGGCTGTTCTTCAGGAAGTTACTAATGTTTACTGTGAAAATGCATACAAGGGTTGTTTCAACTCAACTAAAATTCAGGCTAAGAAACGCAAGCTGGCTAAGGCTGGTCAAATTAGTGTGTCGAAAGTGAGTCCTTCTGTTAGTGTGGAACCCCTACAATTTGAAGTTGACTCCAAAGCAAAGGAAACAGCATTGCAATCACAAGATACTGTGTGCTCAATTAATTTGGAAAATAATCAACTTCTACCACTGGCTGCCATTGATTGTTGCAAGGACTTTAGATTGCCTGAAAGTCAGATATCTGGTATATCTGCTCATCCTTTGATGTCTCAGAACAAAGACAAGAAAGATAACCTTTCGAAACTTTTGACTGCATTGAAGGATCCAGGCATCACTAATATAGATGATTATCTTGAAGATTCTCAGTCATGCAGCCTCTATGCTGCTGATATCTATGACAATCTACGTGTAGCTGAGCTTGCAAGAAGGCCTTATCCGAACTTTATGGAGATGGTGCAGCGAGATATTACTGAAAGTATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACACATTGTTTACAGACACTCTTTACCTCACCGTGTATCTCATAGATTGCTTCCTCTCCAAAAATTACATTGAAAGACAAAGACTTCAGCTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCTCCACGCATCGAAGATTTTTGCTTCATCACGGACAATACATACACGAAAGCTGAGGTACTAAAAATGGAGAGTCAAGTGTTAAAGTCATCAGAATATCAACTGTTTGCTCCCACTATACAAACATTCCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCAGACAAGGACCCCAGCCTTGAATTGGAGCACCTGGCCAATTACCTAGCTGAACTAACACTGATGGATTATGGTTTCTTGAATTTCCTTCCCTCTATTATTGCTGCATCAGCTGTATTTCTTGCCAGGTGGACACTAGATCAGTCAAATCATCCATGGAATCCAACGCTTCAACACTATGCCTGCTATAAAGCATCAGATTTGAAAACCACAGTTCTGGCATTACAAGACCTGCAGCTCAATACTGAGGGTTGCCGTCTAACTTCTGTCCGCACGAAATACAGACAAGACAAGTTTAAGTGTGTAGCGGCTTTGTCTTCACCAAAACTGCTTGAAACATTGTTCTGAAGACAAAGATAATTGACAACCAAGCCATTGCAAGGGACTCCTAACTGATATGCATTGTACACAACAAACAAATCCTTCCTAATCTAATTTTCCCTTCAACCTCCATTCATGATCCGAGATATCTTATGTATGTACATTACGTGCTAAGCAGTCTGATATGTACACAACAAATATATTCTATTTCTGTATGTATATTACATGCTAAGCTGTCTGAGATAGAGCTAGAAACCCAAGATGACCTGGATATTTTGAAGTTACATGTAGTAATGGCATATGTTTGCCTTAGACTTATTCAGTCCTAC 1867 0.4124 MKKENSVTLKARERPGRLTRARAAAALRTSGQQNQNQLSRVNSKTTVSDTSCLQRKKRAVLQEVTNVYCENAYKGCFNSTKIQAKKRKLAKAGQISVSKVSPSVSVEPLQFEVDSKAKETALQSQDTVCSINLENNQLLPLAAIDCCKDFRLPESQISGISAHPLMSQNKDKKDNLSKLLTALKDPGITNIDDYLEDSQSCSLYAADIYDNLRVAELARRPYPNFMEMVQRDITESMRGILVDWLVEVSEEYTLFTDTLYLTVYLIDCFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMESQVLKSSEYQLFAPTIQTFLRRFLRAAQASDKDPSLELEHLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLQHYACYKASDLKTTVLALQDLQLNTEGCRLTSVRTKYRQDKFKCVAALSSPKLLETLF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00597 466 CDD CYCLIN_AtCycA-like_rpt2 336 450 - -
Pste6g00597 466 PIRSF Cyclin_A_B_D_E 11 465 IPR046965 GO:0016538|GO:0044772
Pste6g00597 466 FunFam Mitotic cyclin 6 221 321 - -
Pste6g00597 466 SMART Cyclin_C_2 336 459 IPR004367 -
Pste6g00597 466 SUPERFAMILY Cyclin-like 196 332 IPR036915 -
Pste6g00597 466 Gene3D - 207 455 - -
Pste6g00597 466 FunFam Cyclin A1 323 455 - -
Pste6g00597 466 Pfam Cyclin, C-terminal domain 336 458 IPR004367 -
Pste6g00597 466 SUPERFAMILY Cyclin-like 336 461 IPR036915 -
Pste6g00597 466 Gene3D - 221 334 - -
Pste6g00597 466 PANTHER CYCLINS 168 447 IPR039361 -
Pste6g00597 466 CDD CYCLIN_AtCycA_like_rpt1 197 332 - -
Pste6g00597 466 SMART cyclin_7 243 327 IPR013763 -
Pste6g00597 466 SMART cyclin_7 340 428 IPR013763 -
Pste6g00597 466 Pfam Cyclin, N-terminal domain 207 332 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00597 Pste-Chr6 2243404 2249901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00597 1 466 Core Cell Cycle Gene Families AT1G80370 54.906 1.21e-163 468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00597 6 2243404 2249901 Pste6g00597 6 2243404 2249901 ECH