Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00565 GAACTATGTCACTGAAGAAACAGAGTGGGGTTAGGGTTTAACTTCTCACTCTTCAAGGTTCAGACTTTTGTTTCCCTTCTGATTGAATCGAAGCGCCGCACCGGTTTTGTTTTCTGCTTAAGAAAATTGAAGCATCCTAAGGGTTATTCTAAGGTCGGGAGAAAAGATGAAGCAAGTGGTTGGAATGGTGGTTTCAAATAAGATGCAGAAATCAGTGGTGGTAGCAGTGGATAGACTATTCTACCACAAAGTGTATGATCGATATGTCAAGCGCACTTCTAAATTTATGGCTCATGATGAGAACAATCTTTGTAACATTGGTGACCGAGTTCGGTTGGATCCTTCTAGGCCATTGAGCAAACGTAAGCATTGGGTGGTTGCTGAAATTCTCAAGAAAGCACGTATATATGTTCCACCCTCAACCTCAACGTCAGTGCCTGAGAATGTGAGCTCCAGCTCTGAAGCACCTACTTCCTGAATTGGCTGAAGGTATTATAACGTATTTTGGCTGTCAATATCTACAGAAGTTGTAGCTGTTGGTATTGAAGTGAAACTGGAAATAAAGTTTAGCACTTTATCTGCATGAGTTGATCATAGTTTGCAACCATATTCAAGTTACTCATTTAAGGACAGTAATGTAAAAAACATTAGTTCTTATAGTTATATGGCAGGTTGTTAACTGTAGTCTAATGCATTTAATTGACAGTGTACTGTATGATACCATGCATTTCTAGTAACAATCGATTATAAGTTTGCATGCCATTGCATCTTGAATTTTCCTGAGCTATTATGTGTTAAAATAGCTTAGTGTAATGGAAATGGGAACATCAACCTTTTCCATTGTTATCATCATAGAAGGAATTTGAAATCTCCTTTATTTGTCATTCTTAGATTGTGTTCCAACTTCAAGTTTTTATGGTAGTAAAAATTTTAATATGCATAGGTCTATGGTTGATTAGCTTGTATCTTGATGGGTTAAAATAAATCTGCTGCAATTATACAGTCTTATTATAGATATCACTGTTGTGTGATCTTTATTGCCAGTATGCCATCTAGGCAAATGGATTGTAGTGTAGAGTATGATATAAAGTAGA 1094 0.3665 MKQVVGMVVSNKMQKSVVVAVDRLFYHKVYDRYVKRTSKFMAHDENNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKARIYVPPSTSTSVPENVSSSSEAPTS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00565 103 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 83 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 Gene3D - 1 98 IPR012340 -
Pste6g00565 103 NCBIfam 30S ribosomal protein S17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Pste6g00565 103 SUPERFAMILY Nucleic acid-binding proteins 2 90 IPR012340 -
Pste6g00565 103 FunFam 30S ribosomal protein S17 1 101 - -
Pste6g00565 103 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00565 Pste-Chr6 2098755 2100354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00565 6 90 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 34.884 2.47e-06 42.0