Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00556 GTGACATTAATGTTTATTTATCGTAAATATAATATAAATCTAAATACAAATTCTATGGCACGGGAGATTGTTCGCCAAGAATCTAGGGATGACCTTGGCAATCGCAGTCGACTATGGGATCCTATTGAAATTTATGATGTTTTGAAAAATGACAAGGGGGCAGAGGCCATTAGAAGCATAACAGCACCATTGTCAACATTGGAGAATCTGAAGTTAAGGCCAAACATATTTGCTAAGATGAGCAAACTACAATTTTTGGATTTTCATTGCAAACGCCTTGATCACTACTGGGATTTTCTTCCACAAGGGCTGGAATCTTTGCCAAATGAGTTAAGATATCTTCGCTGGGTGTATTACCCTTTGACATGCTTGCCAGCACAATTTTCTGCTGAAAAGTTAGTTATATTAGACTTGTCAGGTAGCCTAGTGGAGAAACTTTGGCATGAAGTGAAAAATCTGGTGAACTTAAAGAAGGTTAAACTCCGTTGGTGTAAATATCTACAAGAGATGCCAGACTTTTCAAAATCCGCTAATCTTGAGGTACTGGATGTTAGTTGTTGTGAGGAGTTGACTAGTGTGCATCCATCTATTTTCTCTCTAGAGAAGCTTGAGAAATTAGACCTTAGTGGATGCAGTTCCCTCATCAAATTTTCCAGTGATAATGCCCACTTAAGCTCCTTACTTTATCTAACTCTCAATGACTGTGAAGAACTAAGGGAATTCTCAGTGACAACAGAGAATGTGATTGAACTAGATTTATCAGGGATTTGCATTAGTTCATTGCCATCATCTTTTGGCAATCTTGCCTCCATGCATCAAGAATTTTACAATTTTTGCAGCAAGCTTTGCATTCTTCCGAAGCTTCCTCCATCCCTTGAAACACTACGTGTGGCTGAGTGTGAATCACTTGAGACTCAACATTTATCTGTTCCAAAACTTGATCATGTGGAAAATTACAATGATTACAGTGATCTCCATGATTCTTATCAAGCAGTGTACATGTATCCAGGAAGCAGTGTTCCAGAGTGGTTGGCATATAAGACGAGAAAGGATTATATAATTATTGATCTCTCTTCTTCTCCGCCTTCTGTTTTGGGTTACATTTTCTGTTTAATTCTGGTCAAGGAGACACAGGAGGTTTTGGGTTCTACATTGCAATTTAAAATCACTATCAGTAATGGTAATAATGACTGTGAAGCAGACAATGTTGAAATACACACTTCGGGGCCGTGTGGCTTCATTGATTCGGACCATGTGTGCATGATGTATGACAAACGATGTTCTTCCTACCTGAACAGAAGTGCTAGAAGTCTGCTAAAGTTTAAAGTCAAAGTAGCAGTGCTTACATGTTATGAACAGCTGGAGTTGTTAAAAGGGTTTGGGGTCAGCCCAATAAACACCTATGAATATGACGGTTCTGTTCAACACATGGAACTGACTGAAGTTGAGCTGCTTGGAGAAATCATAAATATTGTTAATCTGGCGTTGATGAGGTTGGGTAAGCATCGACATAACATGAAACGAGTTATAGGAATTGAAAAACCAATTCAATATTTAGAATCATTGGTAAATCAGGAGTCAAAAAATGTCAGCATTATTGGAATTTGGGGTATGGGTGGTATTGGAAAGACTACCATTGCAGAAGAAATATTTAGCAAAATATATTCTGAATATGATGATAGTCAAGAACAAAAGATGTTTTTAGATCTTGCATGTTTCTTTGCTGGATTGAATTTGAAAGTGGATGACATGAAAATTTTATTGAAAGATGGTGAAAGAGAGAACTCAGTGGTTGTTGGATTAGAAAGATTAAAAGATAAAGCTCTTATAACCATTTCAAACGATAATATTATTGTTCGCCAAGAATCTGTTGAAGAGCCCGGCAAACGTAGCAGATTAAGGGATCCTGATGAAGTTTATGCAGTTTTAAAATATAATAAGGGAACTGAGTCCATAAGAAGCATAAGGACAGATTTGTCAGTAATTAGCAGGCTGAAGTTAAACCCTGACATATTTACCAAGATGACTAAACTACAATTTTTGTATATTCGTGGTGAGTATGAACGAGATGACTTTGATCATTTTCCAGATGAGCTAAGATATCTTGACGGGCTTCAATATTTGCCAAATGAGCTAAGATATTTCGTTTGGAGCCATTGCCCTCTGAAATCCTTACCAGAGAACTTTTCTGCTGAAAACCTTGTTGTGTTGGACTTGTCATATAGCCATAATTTGAAGAATTTGAAAGAGCTTAAAGTACCTTGTTCTGTAAACTTGAAGGAGCTGCCAGATCTTTCAGAAGCCACAAATCTTGAAGTATTGGATATCAAGGGTTGTCCACGATTGACTAGTGTGTCTCCATCTATTTTCTCACTTAACAAGCTCAAGATAATGAGACTAGATTATCGTTCCTTTACCAAAATTGTAATGAATAACCATGTAAGCTCTCTTAGTTTTTTCACCCTTATAGGGTCTATCAAAGTATTCAAACGAAAAGAAATTTCGGTGACAACAGAGACTATGAATAATGAACCTGCTTCACGCATGTGTTCGAATGTTTCACCCCTTTCATTTGTATGGCAAAGCAAGCTCGAAATGTTTAGGAAAACCAAAAGTAACATGGACCAGTGCTTGCTGCCTTCAAGCTTCAACAATCTTAGAAGAGAGCGATATATGAGAGTTCTAGATCCGTGGGTGCTTTGTTTGATTGAGGGTGGCCCTGTATATGTCATAGATTGCCAATCGCTGAAGCATTTATTATTTTCATTAATTCCAGAACAATTCAAGGGTAATAGCAGCGACATTGGTATTCATAATTACCAAGAATTGGTTGGAGAATCAGTGGTAATGGCATTAGATGCAAACTCATCAAATGTTGAAACTCTGTCATTAATACAAGCAAGTGATTATTGGTTTGGTCAAGCACTTGAGCTTTTTAGCTTGTATGCCTTTAACCAAAATAATTTTGGTACGAGTATTATGAGATATCTAAGAGAATTATGTTATGCCAAAGTAATTCCATTAGTTCTTAAAGTTTTGTGTCATATTCGTGGAAAACATAAGGAAGTAAGGGAAAATGAGTTAGACAAACTCAAAGTTATGCCAAATAGAGATAATTTGAAGAATTTAGAAGAAGTTAGCATCTCTAGTTTTGGAAACTTGAAGGAGCTTCCAGACCATTCAAAAGCCACAAATCTTGAAGCACTGATCCGGATATCAGTTTTTGTGTGTGAATTCATCTACCTTTTCTTTAAACAAGCTGGAGTGATTGGATCTTGGTTCTTGTGCCCTTGA 3294 0.3701 VTLMFIYRKYNINLNTNSMAREIVRQESRDDLGNRSRLWDPIEIYDVLKNDKGAEAIRSITAPLSTLENLKLRPNIFAKMSKLQFLDFHCKRLDHYWDFLPQGLESLPNELRYLRWVYYPLTCLPAQFSAEKLVILDLSGSLVEKLWHEVKNLVNLKKVKLRWCKYLQEMPDFSKSANLEVLDVSCCEELTSVHPSIFSLEKLEKLDLSGCSSLIKFSSDNAHLSSLLYLTLNDCEELREFSVTTENVIELDLSGICISSLPSSFGNLASMHQEFYNFCSKLCILPKLPPSLETLRVAECESLETQHLSVPKLDHVENYNDYSDLHDSYQAVYMYPGSSVPEWLAYKTRKDYIIIDLSSSPPSVLGYIFCLILVKETQEVLGSTLQFKITISNGNNDCEADNVEIHTSGPCGFIDSDHVCMMYDKRCSSYLNRSARSLLKFKVKVAVLTCYEQLELLKGFGVSPINTYEYDGSVQHMELTEVELLGEIINIVNLALMRLGKHRHNMKRVIGIEKPIQYLESLVNQESKNVSIIGIWGMGGIGKTTIAEEIFSKIYSEYDDSQEQKMFLDLACFFAGLNLKVDDMKILLKDGERENSVVVGLERLKDKALITISNDNIIVRQESVEEPGKRSRLRDPDEVYAVLKYNKGTESIRSIRTDLSVISRLKLNPDIFTKMTKLQFLYIRGEYERDDFDHFPDELRYLDGLQYLPNELRYFVWSHCPLKSLPENFSAENLVVLDLSYSHNLKNLKELKVPCSVNLKELPDLSEATNLEVLDIKGCPRLTSVSPSIFSLNKLKIMRLDYRSFTKIVMNNHVSSLSFFTLIGSIKVFKRKEISVTTETMNNEPASRMCSNVSPLSFVWQSKLEMFRKTKSNMDQCLLPSSFNNLRRERYMRVLDPWVLCLIEGGPVYVIDCQSLKHLLFSLIPEQFKGNSSDIGIHNYQELVGESVVMALDANSSNVETLSLIQASDYWFGQALELFSLYAFNQNNFGTSIMRYLRELCYAKVIPLVLKVLCHIRGKHKEVRENELDKLKVMPNRDNLKNLEEVSISSFGNLKELPDHSKATNLEALIRISVFVCEFIYLFFKQAGVIGSWFLCP 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00556 1097 Gene3D Ribonuclease Inhibitor 620 844 IPR032675 -
Pste6g00556 1097 Pfam NB-ARC domain 520 559 IPR002182 GO:0043531
Pste6g00556 1097 Gene3D Ribonuclease Inhibitor 45 329 IPR032675 -
Pste6g00556 1097 PRINTS Disease resistance protein signature 532 547 - -
Pste6g00556 1097 PRINTS Disease resistance protein signature 766 782 - -
Pste6g00556 1097 SUPERFAMILY L domain-like 62 306 - -
Pste6g00556 1097 SUPERFAMILY L domain-like 657 1069 - -
Pste6g00556 1097 Gene3D - 495 609 IPR027417 -
Pste6g00556 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 574 IPR027417 -
Pste6g00556 1097 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 471 560 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00556 Pste-Chr6 2069591 2082170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00556 511 779 WRKY Transcription Factor Family AT4G12020 34.641 1.15e-29 126