Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00549 AAATTAAATAGAATAATAATAATGAAAATACATATGTGCTTCATTACCAATCTAAATTTTCTGCATAGGGCTGAAGTTAATCTGCTTGGAGAAATCATTAACATTGTCAATCTTGTCTTGAAGCGGTCGGATAAGAATCCAATTAACCTGAAAAGACTTATAGGAATCGACAGACCAATGCAACGTTTAGAATCCATGATACATCAGGAATCGAAAGATGTCCGTGTTATTGGTATTTGGGGCATGGGTGGTATTGGAAAGACAACCATTGCAAGAGAAATTTTGAAGAAACTACATTCTGAATATCAAGATCGCGAAGAACAAAAGATATTTTTAGATCTAGCATGTTTCTTCATAGGACTGAAAATGAAAATGGACCTCATAAAAGTTTTATTGAAAGATGCTGAAAGAGATAACTCAGTGCTCATTGGATTAGAAAGGTTGAAAGATAAAGCTCTTATAACCATTTCAAAGGATAATACTGTGCATATGCATGATATCATACAAGAAATGGGTTGGGAGATTGTTCGCCAAGAGTCTATTGAAGAGCCTGGCAAGCGTAGCAGATTATGGGATCCTGATGACGTGTATGAAGTTTTAAAAAATAACAAGGGAACTGAGTCCATAAGAAGCATAAGAGCAGACGTGTCCGTAATTAGGAAGCTGAAGTTGAGCCCTTACATATTTACCAAGATGACTAAGCTAAGGTTTTTGTATGTTCCTAGCGAATATGATCAAGATGACTTTCATCATTTTCCTCATGGGCTTCAATCTTTTCCAGATGAGCTAACATATCTTGATGGGCTTCAATCTTTGCCAACTGAGCTAAGATATCTTGATGGCCTACAATCTTTTTCAGATGAGCTAAGATATCTTGTTTGGAGGAATTACCCTTTGAGATCCTTGCCAGAGAACTTTTCTTCTCAAAACCTTGTTTTGTTGGACTTGACATATAGTCATGTTGAAAAACTTTGGGATGGAGTGAAGAATTTGAAGAGTTTAAAAGAAGTTAAAGTCACTGGCTCTGTAAACTTGAAGGAGCTGCCAGACCTTTCAGAAGCCACAAATCTTGAAGTATTGGATATCAGTGGTTGTGTTCAGTTGACTAGTGTGACTCCATCTATTTTCTCACTCAACAAGCTCAAGATATTGAAACTAGATTATCATTCCTTTTCCAAAATTATAATCAATAACCATATAAGCTCTCTAAGTTTTTTTACAGTTAAAGGGTCCATAGAACAAAAGGAAATTTCACTGAGATCAGAGAATATAATTAGTAATCCTGTCTCATGCATGTGTTTGAATCTGAAACCCTCGTCATTTATATGTAAAAACAAGCTCGAAACATTAAGCAAAATCACAGGTAGCAAGTGTCGGTACTTGCAGCCTTCAACCTTCAAGGAACTCAGAAGACAGCGATATCTGAGAGTTCTAGATCCGAGGGTCATTTGTTTGATTGAGCTTGGCCCTGTATATCTCATAGATTGCCTATCATTGAAGAATTTATTATCTCCCGCAATTCTTGATCAACAATTCAAGAATATGAGCTGTGCATGCCTTGGCATTATTCAGAGATACCATGGATTGGTCGGAGCATCTGTGCTGGTACAAGAAATTATCAAAGAAGTTGATCATAAATTGATCAAGCGTCGTAAGCACTCATTTAAGTCAGAAGGACTTATTGGAATTGATAAGTCAGTTACACGCATAGAATCATTGTTACGTGAGAAGCCAGAAGATGTTCGTATTATTGGAATCTGGGGTATGGCTGGAATCGGTAAAACAATTATTGCAGAAGAAGTGTTTAATAGAGTATGTTCTGAATATGAAGGTTGTTGCTTTTTGAAAAGTGTAAGGGAACTAGCAAGAAATGGAACAACCACTTTGAAAGAAACACTGTTTTCTACATTGTTAAAAGATGATAGTTCAGGGAGTGCTGAGATAGCTAGACTAAAAGATAAAGCTCTCATAACCAATTCTGAAAACGGTGATATATGTATGGATGACATTACAAAACAAATGGCTTGGGAGATTGTTCGTGAAGAATCTACGAAAGAGCCTGGACGTCGCAGTCATTTATTGGATCCTGATGACATTTATGAAGTATTGAACAACGATAAGGGGACTGCCGCCATTAGAAGCATAAAAGTAAACTTCTCACAAGTAAGAAAGTTGAAGTTATCCCCTCTGGTATTTGCTAAGATGAACAGACTTCAATATCTGCTGGTTCATATGGACAAATATTCTCCTGGAGATGAAAGATATGATGTTTTACCTCAAGGGCTTCAATATGTGCCAAGTGATCTAAAATACCTTTGTTGGACGTATTACCCTCTAGAGTCCTTGCCTGAGCAATTTTCTGCTGAGAAACTAGTCATACTGGACTTGACAGGCAGTCTAATAACTAGAATATGGAAGGGAGTGAAAAATGTGGTCAATTTAAAAGAACTTATCCTCCGGGAATGCACATTTTTGCAAGAGCTCCCTGACTTCATAAAAGCCGAAAATCTTCGACGAGTGGATCTCACTTCTTGTTATCAGCTAATGAGTGTGCATCCATCTATTTTCTCTCTTATCAGGCTTAAAGATTTGAAACTAGACGAGTGTAATTCCATTACCACACTCTCTGGCAATATCTGTTCAAGTTCCCTCGATTTTCTCGACCTTAGCGGATGCCCCAAACTAAGAGAATTCTCAGTCCTGACAACTGAGAGTTTAATTAATCTAGATTTATCAAACACTAGTGTACATGTATTGCCCTCATCTTGTGTACATGACAACAAATTTTACAGCCTAGTTCTAAGAAACTGTGCCATTGAGAGGTTGCCTTTGTGCACCAAGAATCTTACAGAACTGGCACATCTTGACTTAAGCTTTTGTCAAGAGCTTTGGATTCTACCAGAGCTTCCCCCTCAACTCCACACTCTAATTGCAGTGGATTGCAAATTTCTGAGGATTGTATTGTTCCCTTCAACTGCTCTTGAACAATTCAATGAATACAGGCAAAGGGTTGAGTTCTGGAATTGCTTCACATTGGATCGACGTTCTCTCAGGGATATAGAGTTGAATGCACAAATCAACATGATGGCATCTACACATCACTATTATCGTTCTCAAGCAATGTATGGGTATCCAGGAAGCACTGTTCCGAAGTGGTTAGAGTACAGGAACAAATATACTGAGAATGATATAATTATTGATTGCTCTACTGATCTGCCTTCTCCTCAGTTACATTTCATTTTCTGTTTCGTCCTTCAAGAAGACAGTTTGAAAATTTCAGATGAACCATTGAAAATTAACATCACCTTAATTGATGATGAGAATGAAGGTAAAAAAGACAGTTTCATAATAGAAACTTTTGTATCAACTGACAAATTTGCATCGGATCACGTGTGTGTGATATATGATGAGCATTGTTCTGAATACCTAAGTGACAGAGTAAGAAATATGGTTAAGTTTAAAATCAGTGTTTCAGCAAAGTGTACAGCGGTTGTTGGAGAGGAGAAAAAAGTGCATTGGCTTGTGTTGAAAGGGTCAGGGGTCAGCATAATAAACACCTCAGTCTATCAAGATTTTGTCAAACAAATGGAATTGCGTGACAAACAAAATGAACTGCGATTGCCATCATGGATGCGTAGAAATTAA 3645 0.3734 KLNRIIIMKIHMCFITNLNFLHRAEVNLLGEIINIVNLVLKRSDKNPINLKRLIGIDRPMQRLESMIHQESKDVRVIGIWGMGGIGKTTIAREILKKLHSEYQDREEQKIFLDLACFFIGLKMKMDLIKVLLKDAERDNSVLIGLERLKDKALITISKDNTVHMHDIIQEMGWEIVRQESIEEPGKRSRLWDPDDVYEVLKNNKGTESIRSIRADVSVIRKLKLSPYIFTKMTKLRFLYVPSEYDQDDFHHFPHGLQSFPDELTYLDGLQSLPTELRYLDGLQSFSDELRYLVWRNYPLRSLPENFSSQNLVLLDLTYSHVEKLWDGVKNLKSLKEVKVTGSVNLKELPDLSEATNLEVLDISGCVQLTSVTPSIFSLNKLKILKLDYHSFSKIIINNHISSLSFFTVKGSIEQKEISLRSENIISNPVSCMCLNLKPSSFICKNKLETLSKITGSKCRYLQPSTFKELRRQRYLRVLDPRVICLIELGPVYLIDCLSLKNLLSPAILDQQFKNMSCACLGIIQRYHGLVGASVLVQEIIKEVDHKLIKRRKHSFKSEGLIGIDKSVTRIESLLREKPEDVRIIGIWGMAGIGKTIIAEEVFNRVCSEYEGCCFLKSVRELARNGTTTLKETLFSTLLKDDSSGSAEIARLKDKALITNSENGDICMDDITKQMAWEIVREESTKEPGRRSHLLDPDDIYEVLNNDKGTAAIRSIKVNFSQVRKLKLSPLVFAKMNRLQYLLVHMDKYSPGDERYDVLPQGLQYVPSDLKYLCWTYYPLESLPEQFSAEKLVILDLTGSLITRIWKGVKNVVNLKELILRECTFLQELPDFIKAENLRRVDLTSCYQLMSVHPSIFSLIRLKDLKLDECNSITTLSGNICSSSLDFLDLSGCPKLREFSVLTTESLINLDLSNTSVHVLPSSCVHDNKFYSLVLRNCAIERLPLCTKNLTELAHLDLSFCQELWILPELPPQLHTLIAVDCKFLRIVLFPSTALEQFNEYRQRVEFWNCFTLDRRSLRDIELNAQINMMASTHHYYRSQAMYGYPGSTVPKWLEYRNKYTENDIIIDCSTDLPSPQLHFIFCFVLQEDSLKISDEPLKINITLIDDENEGKKDSFIIETFVSTDKFASDHVCVIYDEHCSEYLSDRVRNMVKFKISVSAKCTAVVGEEKKVHWLVLKGSGVSIINTSVYQDFVKQMELRDKQNELRLPSWMRRN 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00549 1214 Gene3D - 33 184 IPR027417 -
Pste6g00549 1214 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 534 640 IPR044974 GO:0006952
Pste6g00549 1214 Gene3D Ribonuclease Inhibitor 900 1057 IPR032675 -
Pste6g00549 1214 Pfam NB-ARC domain 565 679 IPR002182 GO:0043531
Pste6g00549 1214 Pfam NB-ARC domain 64 173 IPR002182 GO:0043531
Pste6g00549 1214 Gene3D - 541 692 IPR027417 -
Pste6g00549 1214 SUPERFAMILY L domain-like 727 998 - -
Pste6g00549 1214 PRINTS Disease resistance protein signature 76 91 - -
Pste6g00549 1214 PRINTS Disease resistance protein signature 947 963 - -
Pste6g00549 1214 Gene3D Ribonuclease Inhibitor 195 477 IPR032675 -
Pste6g00549 1214 Gene3D Ribonuclease Inhibitor 703 899 IPR032675 -
Pste6g00549 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 141 IPR027417 -
Pste6g00549 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 551 679 IPR027417 -
Pste6g00549 1214 SUPERFAMILY RNI-like 225 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00549 Pste-Chr6 2042383 2054782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00549 636 992 WRKY Transcription Factor Family AT4G12020 33.604 1.81e-36 149