Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00534 atgacgcctccatcatcatcttctacctctccatctccatcttcttcggctgaagtcaacacttttcttgacgaagagaattgtcccaaaggaatacagctgagagaaggactattggcagcaatagaaagatctcagatatgtgttgttgttttctccacatactatactgaatcaatttggtgtcttaacgagttggaaaatatcattgattgccacaaaacttatggccaggttgttgtgcccatattttatgatgttgacccatccaatgttcgtcatcaaacaggtgagtttggaaacgttttgaaagcatgtgcaagaaaaagcttttcgggagaatctctcttatcacggtggagcagcgtactcactgaagctgcaaatttctctggttgggatgtgaggaattgcagatcctttctggttttggtatgtcactga 444 0.0 MTPPSSSSTSPSPSSSAEVNTFLDEENCPKGIQLREGLLAAIERSQICVVVFSTYYTESIWCLNELENIIDCHKTYGQVVVPIFYDVDPSNVRHQTGEFGNVLKACARKSFSGESLLSRWSSVLTEAANFSGWDVRNCRSFLVLVCH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00534 147 ProSiteProfiles TIR domain profile. 1 147 IPR000157 GO:0007165
Pste6g00534 147 SMART till_3 4 130 IPR000157 GO:0007165
Pste6g00534 147 PANTHER TMV RESISTANCE PROTEIN N-LIKE 17 137 - -
Pste6g00534 147 Gene3D - 12 145 IPR035897 -
Pste6g00534 147 Pfam TIR domain 18 133 IPR000157 GO:0007165
Pste6g00534 147 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 133 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00534 Pste-Chr6 1987761 1991030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00534 17 143 Miscellaneous Gene Families AT4G19920 36.154 3.60e-18 76.6