Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00533 atgtgtatgatagggatatggggaatgggaggatcgggtaaaactaccactgccaaagctatctataatcaaattcatcataaattcttgggcagaagtttcattgaaaatgtcagagaagtttgtgaaacagataataaagggcaagttcaattgcaagaacaactgctatctgatattctaaaaactaatgagaagatacatagcgtcgggatgggaacagctatgatagagaaaagacttgctggaaaaaaaagggtacttattatacttgatgatgtgaataactttgagcaattaaaaaacctttgtggaagtcgtaaatggtttgggcaaggaagcatcataatcattacaacaagagatgttcgcctacttaaaagacttaaagttgattatgtttataaaatggaggaaatgaatgaaaatgagtccattgagctgtttagttggcatgcttttggagaagcagagccaagagatgactttaatgaactcgcaagaaatgtgattgtttattgtggaggattgccactagctcttgaagtccttggctcctacttatctgagaggacaaagaaagagtgggaaagaaaaaacagagcctatgttacagacatactgaatggatgcggattacatgctgatattggaataacaattctcatagagcgtagtctcataaaaattgaaaagaacaacaagcttggaatgcatgatttgctaagagacatgggaagagagattattcgtgaaagttcaacaaaggaacctgggaaacgcagccgattgtggtttcaagaggatgtaattgatgtattagcaaagaacactgggacagaagctattgaaggattggctctgcaattgcatttaactggtagagattgctttgaagcttatgcttttgaagaaatgaagaaattgagactattgcaacttgatcatgtacaactcatcgggaattatgactacctttctaagcaactcaaatggatacgttggcaagggtttcccttaaaattcatacctaaaaactttaaaatgaaacgtttaattgctatagatttaaaacacagtaatcttcgactagtttggaaagagccccagattgacaaattagaagaagatatagtccagatggagtccttgacaactctaattgctgaaaatactgcagtgaaacaagttcccttttcgataggattggcaaacaaagagtcatatgatgttttcctgccaggtgacaattatccttactggttatcccatataggtgcaggacattcggtgtatttcactgtgcctgagaatcttcgtatgaaaggaatgactttgtgtgttatttatttattaacccctgagaagacagcaactgaatgtcttattagtgttgtaatggtcaatcacacaaagtgcaacacccagatatacaagcgagacactgtaatttcttttaatgatgaagattggcaaggtataatatcacagttgcaacctggagataaggtcgagattttggtgacttttgagcatggattggttgttgagaagatagctgtttatttgatgtgtggtgaatcaattgacatggaaattaagtcatcccctgcgccaaagaaagagagaaagaaaaaggctcttttaagattcataaagagatttgtaaagtaa 1674 0.0 MCMIGIWGMGGSGKTTTAKAIYNQIHHKFLGRSFIENVREVCETDNKGQVQLQEQLLSDILKTNEKIHSVGMGTAMIEKRLAGKKRVLIILDDVNNFEQLKNLCGSRKWFGQGSIIIITTRDVRLLKRLKVDYVYKMEEMNENESIELFSWHAFGEAEPRDDFNELARNVIVYCGGLPLALEVLGSYLSERTKKEWERKNRAYVTDILNGCGLHADIGITILIERSLIKIEKNNKLGMHDLLRDMGREIIRESSTKEPGKRSRLWFQEDVIDVLAKNTGTEAIEGLALQLHLTGRDCFEAYAFEEMKKLRLLQLDHVQLIGNYDYLSKQLKWIRWQGFPLKFIPKNFKMKRLIAIDLKHSNLRLVWKEPQIDKLEEDIVQMESLTTLIAENTAVKQVPFSIGLANKESYDVFLPGDNYPYWLSHIGAGHSVYFTVPENLRMKGMTLCVIYLLTPEKTATECLISVVMVNHTKCNTQIYKRDTVISFNDEDWQGIISQLQPGDKVEILVTFEHGLVVEKIAVYLMCGESIDMEIKSSPAPKKERKKKALLRFIKRFVK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00533 557 Gene3D - 1 134 IPR027417 -
Pste6g00533 557 Pfam NB-ARC domain 3 200 IPR002182 GO:0043531
Pste6g00533 557 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 385 IPR044974 GO:0006952
Pste6g00533 557 SUPERFAMILY "Winged helix" DNA-binding domain 203 274 IPR036390 -
Pste6g00533 557 SUPERFAMILY L domain-like 238 399 - -
Pste6g00533 557 PRINTS Disease resistance protein signature 304 320 - -
Pste6g00533 557 PRINTS Disease resistance protein signature 81 95 - -
Pste6g00533 557 PRINTS Disease resistance protein signature 3 18 - -
Pste6g00533 557 PRINTS Disease resistance protein signature 174 188 - -
Pste6g00533 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 208 IPR027417 -
Pste6g00533 557 Gene3D - 139 207 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00533 Pste-Chr6 1982690 1986600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00533 4 366 WRKY Transcription Factor Family AT5G45050 30.070 7.16e-49 181