Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00532 GTAAAACTAGCCGTTAGGATTAAGAAAATTGCAACATTTGACTCATTCTACTCACCTCATCTCATTTATCTTTGTGTCACACTACAACCTTAAACCCCACCAACACTTTTCTCAATCACATATAGTCACATGCTTTTTTCAGAACCGTAGTCCTTCTCTTTTCACTCTCCACTCTCCATTTTCTTTGTGTTATTTAGATCCTCCCCTATTGGAACTCATTGTGCAGTAGTAGTACTGTTTTCTGAGAAGTGAGAGCCATAAAATAGTGTGCAAGTGGAACCTGTTTGTTTGTGTTTTACTTTCTTTGCTTAGCCATTGTTTGTTCCAAGTTCCCACTTGATTGGTTTCATGGGACACAACAGTTGTCATGTCAAAGATTTCCACAGAGACCCTTTTCAGATTAGCCTCTCTTTTGCTTCAAATGGTGGTGGGAGGAGGAAATGGGTGGCCTATCACAAAGGTGGTAGTGGTTTCATTTACATAGCCTTTTTGCTGTTTCTTGTGCAAGCTTTGGCTTTTGCCATTCAGCCTGTTTCAGGGAGCTTGTGGGATGGGGTGGTTGTGACTCAGGCTGATTTTCAAGCCTTGAGGGCTATTAAGAATGAGTTGATTGATTTCAAAGGGGTGCTCAAGAGTTGGAATGATAGTGGTGTAGGTGCTTGTTCAGGAGGGTGGGCTGGAATCAAGTGTGTGAATGGTGAGGTTATTGCAATTCAGCTTCCTTGGAGAGGGTTAGGTGGCAGGATCTCAGACAAAATTGGCCAACTTCAGTCTCTAAGGAAGCTCAGTCTCCATGACAATGCTCTTGCTGGTCCAGTTCCTTTGTCACTTGGATTCCTACCTAATCTCAGAGGAGTTTATCTCTTCAATAACAAACTTTCAGGTTCTATCCCTCCTTCTCTTGGAAATTGTCCAATGCTTCAGTCTCTTGATATTAGCAACAATTCCCTCAGTGGTAAAATCCCTTCCACTTTAGTAAAATCCACTAGGATATTTAGGATCAATTTGAGCTTCAACTCACTTTCTGGATCTATTCCTAGTAGTTTCACTATGTCTCCTTCTCTATCCCTTCTTGCCCTCCAACACAACAATCTCTCTGGTTCTATCCCAGATTCTTGGGGTGGAACTGGAAAGAAGAAAGCTTCCCAGCTTCAAGTTTTGACCCTTGATCACAATCTCATTTCTGGAACCATCCCTGTTTCTCTAGGCAAGCTAGCTTTACTTGAAAATGTTTCCTTGAGTCATAACCAGATCGTAGGGTCTATTCCAAGTGAACTAGGTGCACTTTCTAGGCTTCAAATTCTTGATCTATCAAACAATGCCATCAATGGCAGCCTTCCTGCTAGCTTTTCCAACCTCTCTTCTCTTGTTTCATTAAATCTAGAGAGCAATCAACTTGCAAACCTTATTCCAGATTCTTTGGACAGGTTGCACAACCTTTCTGTGCTTAACCTGAAGAACAATAAGCTTGATGGTCAAATCCCACCAACAATTGGGAACATCTCAAGCATTAGCCAAATTGATTTCTCTGAGAATAAATTAGTTGGAGAGATTCCAGATTCACTTACCAAACTTGCAAATCTCAGTTCATTCAATGTCTCTTACAACAACCTATCTGGTCCTGTTCCATCCCTTCTTTCCAAAAGATTCAATGCTAGCTCTTTTGCAGGGAACCTTGAGCTATGTGGGTACATCAGTTCAAAACCATGCCCTTCACCCCCTCCTCATAATCTTCCAGCTCAATCACCGAATGCTCCTTCCAAGCCACATCACCGCAAACTAAGCACCAAGGACATAATCCTCATAGTTGCAGGTATTCTCCTGTTGATTCTGTTACTACTGTGCTGCTTCTTGCTGTGTTGTTTGATCAGGAGAAGAGCTGCATCAAGCAGAAAGAGTGGCAAGACTGCTAAGGCAGCAGCTTCGGCCAGGAGTATTGAGAAAGGTGCCTCAGCTGGTGGCGAAGTTGAATCAGGAGGTGAAGCTGGTGGCAAACTAGTTCACTTTGATGGACCTTTTGTGTTTACTGCTGATGATCTTTTGTGTGCAACTGCTGAGATAATGGGAAAAAGTGCATATGGAACAGCATACAAAGCAACACTGGAAGATGGTAACCAAGTTGCAGTGAAAAGGTTGAGGGAAAAGACAACTAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTTCACTTGGCAAAATCAGACACCCAAATCTCCTAGCACTTAGAGCCTACTATTTGGGACCAAAGGGAGAGAAGCTTCTTGTGTTTGATTACATGACCAAAGGAAGCCTAGCATCATTCCTTCACGCTCGTGGGCCTGAAATTGTTATTGAATGGCCAACAAGGATGAAGATAGCCATTGGAGTCACTCGCGGTTTGAGCTACCTCCACAGTCAAGAGAACATTGTACATGGGAACCTCACATCAAGCAACATACTATTGGATGAGCAAACAGAAGCACACATAACAGACTTTGGTCTCTCAAGGCTAATGACTACTTCTGCCAACACCAACATCATTGCAACAGCAGGAAGCCTTGGCTACAATGCACCTGAGCTTTCAAAGACCAAGAAGCCTAATACCAAGACTGATGTGTACAGCCTTGGTGTAATCATGTTGGAGCTCCTAACCGGAAAACCACCCGGCGAGCCGACCAATGGCATGGACTTGCCTCAATGGGTGGCATCCATAGTGAAGGAAGAGTGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAGCCATAGGAGATGAATTGCTTAACACATTGAAGTTGGCTCTGCATTGTGTGGATCCTTCTCCTACTGCTAGGCCTGAAGTTCAGCAAGTTCTACAGCAATTGGAGGAGATCAAACCAGACTTGGCTGCAGGGGATGATGGAGCTAATGTTCAAGCAACTGAGTAAGGGTTGACTTGAGAGAGTGGAGTGTGTCTTACAGGGAATTATTTTATTTTACTTGAGAAAGAATATATGTTTTATTCTTTATTTATTTGTTCATTGAGTTTATGATGTATATATACGAGTGAGGGTTTATTTACACTAAAGTATTCTTTTTAACTTGGAG 3073 0.4273 MGHNSCHVKDFHRDPFQISLSFASNGGGRRKWVAYHKGGSGFIYIAFLLFLVQALAFAIQPVSGSLWDGVVVTQADFQALRAIKNELIDFKGVLKSWNDSGVGACSGGWAGIKCVNGEVIAIQLPWRGLGGRISDKIGQLQSLRKLSLHDNALAGPVPLSLGFLPNLRGVYLFNNKLSGSIPPSLGNCPMLQSLDISNNSLSGKIPSTLVKSTRIFRINLSFNSLSGSIPSSFTMSPSLSLLALQHNNLSGSIPDSWGGTGKKKASQLQVLTLDHNLISGTIPVSLGKLALLENVSLSHNQIVGSIPSELGALSRLQILDLSNNAINGSLPASFSNLSSLVSLNLESNQLANLIPDSLDRLHNLSVLNLKNNKLDGQIPPTIGNISSISQIDFSENKLVGEIPDSLTKLANLSSFNVSYNNLSGPVPSLLSKRFNASSFAGNLELCGYISSKPCPSPPPHNLPAQSPNAPSKPHHRKLSTKDIILIVAGILLLILLLLCCFLLCCLIRRRAASSRKSGKTAKAAASARSIEKGASAGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIAIGVTRGLSYLHSQENIVHGNLTSSNILLDEQTEAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIMLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPTARPEVQQVLQQLEEIKPDLAAGDDGANVQATE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00532 854 SUPERFAMILY Protein kinase-like (PK-like) 570 839 IPR011009 -
Pste6g00532 854 Pfam Leucine rich repeat 314 374 IPR001611 GO:0005515
Pste6g00532 854 FunFam Pollen receptor-like kinase 1 643 847 - -
Pste6g00532 854 PRINTS Leucine-rich repeat signature 313 326 - -
Pste6g00532 854 PRINTS Leucine-rich repeat signature 191 204 - -
Pste6g00532 854 Pfam Leucine Rich Repeat 191 209 IPR001611 GO:0005515
Pste6g00532 854 Gene3D Ribonuclease Inhibitor 72 211 IPR032675 -
Pste6g00532 854 Pfam Leucine rich repeat N-terminal domain 75 114 IPR013210 -
Pste6g00532 854 Gene3D Ribonuclease Inhibitor 330 456 IPR032675 -
Pste6g00532 854 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 258 457 - -
Pste6g00532 854 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 73 255 - -
Pste6g00532 854 SUPERFAMILY L domain-like 113 448 - -
Pste6g00532 854 Pfam Protein tyrosine and serine/threonine kinase 570 834 IPR001245 GO:0004672|GO:0006468
Pste6g00532 854 FunFam Leucine-rich repeat receptor-like protein kinase 552 642 - -
Pste6g00532 854 Gene3D Ribonuclease Inhibitor 212 329 IPR032675 -
Pste6g00532 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 266 837 - -
Pste6g00532 854 CDD STKc_IRAK 572 837 - -
Pste6g00532 854 ProSiteProfiles Protein kinase domain profile. 566 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00532 854 Gene3D Transferase(Phosphotransferase) domain 1 644 848 - -
Pste6g00532 854 Gene3D Phosphorylase Kinase; domain 1 572 643 - -
Pste6g00532 854 SMART LRR_typ_2 361 385 IPR003591 -
Pste6g00532 854 SMART LRR_typ_2 409 432 IPR003591 -
Pste6g00532 854 SMART LRR_typ_2 164 188 IPR003591 -
Pste6g00532 854 SMART LRR_typ_2 337 360 IPR003591 -
Pste6g00532 854 SMART LRR_typ_2 140 163 IPR003591 -
Pste6g00532 854 SMART LRR_typ_2 313 336 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00532 Pste-Chr6 1982179 1985868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00532 67 839 Receptor kinase-like Gene Family AT3G51740 70.180 0.0 1053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste6g00532 PK_Tyr_Ser-Thr 2.1e-41 CL0016