Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00521 CGATGATTGTGCATTCCCACTAACACGACGCGATTAATTTGATTGTGATATTATGCAATAATGTGAAAAAGTTGAAATATGCATTGCCTTGCCTTTTGCTTCTTCTTCCCTTGTTAAAAGGTCACACTGACTCACTCATCTCCATTGCCACTGCTATTTTCTCGGATCTATCTCACACCCTTTCTCTCTTTTCATCTTCTCATTTGCTTTCCCTTCACAAGTGAGAGATGGCGCAAATTCTGCTTCATGGGACTCTGCACGCCACCATCTTCGAGGTTGACAGGCTTAATTCTGGTGGTGGCGGCGGCAACTTTTTCAGCAAGCTCAAGCAAAACTTTGAGGAGACTGTTGGTATTGGAAAGGGAGTTACTAAACTCTATGCAACCATTGATCTGGAGAAGGCAAGAGTGGGAAGGACTAGAATTATAGAAAATGAACTTACTAATCCCAGATGGTATGAGTCTTTTCACATTTATTGTGCTCATATGGCTTCAAATATTATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACTTTAATTGGAAGAGCATATGTGCCTGTTTCGGAGGTCTTGGATGGTGAAGAGATAGATAGGTGGGTTGAAATCTTGGATGAGGATAAAAATCCAATACATGAGGGTTCAAAGATCCATGTGAAGCTGCAATATTTTGATGTCACAAAAGACCGCAACTGGGCTCGAGGCATAAGAAGTCCTAAATTCCCTGGAGTTCCCTATACTTTCTTCTCACAGAGGCAAGGTTGTAAGGTATCTCTGTACCAAGATGCTCATGTACCTGATAATTTTGTACCTAAAATACCTCTTGCTGGAGGCAAGAACTATGAGGCTCATAGGTGTTGGGAGGATATATTTGATGCAATCAATGATGCAAAACACTTGATATACATTACTGGTTGGTCTGTATATACTGAAATTTCCTTGGTGAGGGATTCTAGGAGGCCAAAGCCCGGGGGAGACCAAACACTTGGTGAGCTTCTCAAGAAAAAAGCAAGTGAAGGTGTTAAGGTATTGATGCTTGTTTGGGATGATAGAACATCAGTTGCTTTGTTGAAAAAAGATGGACTGATGGCTACTCATGACGAAGAAACTGCACAGTTCTTCAGTGACACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCCGATGATGGTGGGAGCATTGTTCAGGATTTACAAATTTCTACCATGTTTACTCATCACCAGAAGATTGTGGTGGTTGATGGTGCGATGCCAGGTGAAGGGTCAGATAAGCGAAGAATTGTGAGTTTTGTTGGGGGTATTGACCTCTGCGATGGAAGATATGACACTGCCTTCCACTCACTTTTCAGAACCCTTGACACAGCACACCATGATGATTTTCATCAGCCTAACTTTCCTGGGGCTGCGATCACCAAAGGTGGTCCCAGGGAACCTTGGCATGACATCCACTCCCGGCTTGAAGGACCCATAGCCTGGGATGTTCTGTTCAACTTTGAGCAGAGATGGAGAAAGCAAGGTGGGAAGGATGTACTTGCTCCACTGAGAGAGCTTGAAGATGTCATTATTCCACCATCCCCGGTAATGTTTCCTGAAGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCGGAGACTCCTGAAGATGCTGCCAGAGCTGGACTTATTAGCGGGAAGGATAATATCATTGATCGCAGCATTCAAGATGCTTATATTAATGCTATTCGACGTGCAAAGAATTTCATCTACATTGAAAATCAGTATTTCCTTGGAAGTGCTTATGCATGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATGTAATCCCAAAGGAACTTTCACTTAAGATTGTTAGTAAGATTGAGGCTGGGGAAAGGTTCACCGTGTATATTGTAGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCAGTTCAAGCTATATTGGATTGGCAGAAGAGAACAATGGAGATGATGTACAAGGATGTTATTCAGGCACTCAGGGCTAAGGGAATTGAGGAAGATCCTCGAAACTATTTGACATTCTTCTGCCTTGGCAACCGGGAAGTGAAGAAATCAGGAGAATATGAGCCTTCTGAACGACCAGATCCTGATTCAGATTATCAGAGAGCCCAAGAAGCCCGACGTTTCATGATTTATGTTCATACCAAAATGATGATAGTGGATGACGAATACATAATCATTGGATCTGCCAACATCAACCAAAGGTCAATGGATGGTTCTAGGGACTCAGAGATTGCCATGGGTGCTTATCAGCCCTACCATTTGGCTACCAGGCAGCCAGCACGAGGCCAGATCCACGGCTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTTCATGAGTCCTTCCTCCAGCCAGAAAGTGAAGAATGCGTTAATAAGGTGAACCAAATCGCTGACAAATATTGGGATCTGTATTCCAGTGAGTCACTTGAGCATGATCTTCCTGGTCACCTTCTCCGCTATCCTATTGGGGTCGCCAGTGAAGGAGATATCACTGAGTTGCCAGGATTTGAATTCTTCCCTGATACCAAGGCTCGCATTCTTGGTGCCAAAGCTGACTACCTCCCCCCTATCCTCACCACTTAGTTTTATTTTCGCTTACATCCTAATCTACTTAGTAATAATCTTAATGTACTACTATGTGATGTCTTGTGGAGATTTTTTTCCCTTCGACATATTTTAGTTATCTGGTTTCTTTTCTATTCAGTGTCAGGGTCATTGTCATTGTTGTTTCTATACCTGTTTTTTTGTTTAAATTGTTGTGACAAAAATACAATATCCAGATTTTAATTTGGAAGCAAGTCATGCATGCTAATACAAATCAGAAATGCATTTTTGAGTCTTAAATA 2920 0.4267 MAQILLHGTLHATIFEVDRLNSGGGGGNFFSKLKQNFEETVGIGKGVTKLYATIDLEKARVGRTRIIENELTNPRWYESFHIYCAHMASNIIFTVKDDNPIGATLIGRAYVPVSEVLDGEEIDRWVEILDEDKNPIHEGSKIHVKLQYFDVTKDRNWARGIRSPKFPGVPYTFFSQRQGCKVSLYQDAHVPDNFVPKIPLAGGKNYEAHRCWEDIFDAINDAKHLIYITGWSVYTEISLVRDSRRPKPGGDQTLGELLKKKASEGVKVLMLVWDDRTSVALLKKDGLMATHDEETAQFFSDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDGAMPGEGSDKRRIVSFVGGIDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLAPLRELEDVIIPPSPVMFPEDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSAYAWSADGIKPEDIGALHVIPKELSLKIVSKIEAGERFTVYIVVPMWPEGVPESASVQAILDWQKRTMEMMYKDVIQALRAKGIEEDPRNYLTFFCLGNREVKKSGEYEPSERPDPDSDYQRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGSRDSEIAMGAYQPYHLATRQPARGQIHGFRMSLWYEHLGMLHESFLQPESEECVNKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGAKADYLPPILTT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00521 809 PANTHER PHOSPHOLIPASE D 4 797 IPR015679 -
Pste6g00521 809 Pfam C2 domain 40 128 IPR000008 -
Pste6g00521 809 SUPERFAMILY Phospholipase D/nuclease 152 447 - -
Pste6g00521 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 327 365 IPR001736 GO:0003824
Pste6g00521 809 CDD C2_plant_PLD 2 149 - -
Pste6g00521 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 655 682 IPR001736 GO:0003824
Pste6g00521 809 FunFam Phospholipase D delta 202 445 - -
Pste6g00521 809 FunFam Phospholipase D 468 701 - -
Pste6g00521 809 PIRSF PLD_plant 1 809 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pste6g00521 809 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Pste6g00521 809 SUPERFAMILY Phospholipase D/nuclease 460 739 - -
Pste6g00521 809 Pfam Phospholipase D Active site motif 656 682 IPR001736 GO:0003824
Pste6g00521 809 Pfam Phospholipase D Active site motif 327 365 IPR001736 GO:0003824
Pste6g00521 809 Pfam Phospholipase D C terminal 728 799 IPR024632 -
Pste6g00521 809 Gene3D Endonuclease Chain A 484 701 - -
Pste6g00521 809 Gene3D C2 domain 8 159 IPR035892 -
Pste6g00521 809 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 151 IPR035892 -
Pste6g00521 809 FunFam Phospholipase D alpha 1 6 161 - -
Pste6g00521 809 Gene3D Endonuclease Chain A 200 441 - -
Pste6g00521 809 SMART C2_3c 9 125 IPR000008 -
Pste6g00521 809 CDD PLDc_pPLDalpha_2 493 702 - -
Pste6g00521 809 SMART pld_4 327 365 IPR001736 GO:0003824
Pste6g00521 809 SMART pld_4 655 682 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00521 Pste-Chr6 1941369 1945698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00521 1 809 Phospholipase D Gene Family (Wang group) AT3G15730 83.457 0.0 1439
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01751 2 18005135 18008030 Pste6g00521 6 1941369 1945698 ECH
Pste6g00521 6 1941369 1945698 Pste6g00521 6 1941369 1945698 ECH