Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00493 GTAACTTCCATCAAACTGAAACAAACTCTCTTCACTTTTTGCATTGCATCATTCATCATCCTCATGCTGTCACTTCGCACCACTCACTTTGAAGGAACAACATTAACACCTCTTTCGCTTGCTGGGTTGCTTCCAAGTTTTTTTTTTTTCTTTTCCTTTTCTCCGTTTCTTTCACATAGGCTATGGCTTTTTTGTTTTGTTGCGGAAAATTTTCCTACCGGCAAAATTAGGAGAGATTTGAGCGTTCTCATGATTAATTGTTCTTAGCATTGCCAATATGTCTGTTTCGTTGGTCCAATACTTGCAGTTGCAGACTTCTTAAACAGAAGGCGAGGGAAAGAACAAACTACATGGAGGGTGTTTTCTTTGAAGGAATTACACGCTGCTACTAATAATTTCAACTACGATAACAAGCTTGGAGAAGGGGGGTTTGGCAGTGTGTACTGGGGCCAACTTTGGGATGGCTCGCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAGGGCAGAGACAGAATTTACCATTGAACTCGAAAGATTGGCAAGAATACAACACAAGAATCTTCTCAGTCTTCGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATTGTATATGAATATATGCAAAATTTGAGTCTCCACTCTCATCTTCATGGACATCACTCATTCGAATGCCTTCTTGATTGGAATCGGCGGATGAATATTGCAATTGGTTCTGCTGAAGGAATTGTGTATCTTCATCACCAAGCAACACCACATATCATTCACAGGGATATTAAATCAAGCAACGTGTTGCTGGATTCTGATTTCCAGGCCAGGATTGCTGATTTCGGGTTTGCTAAATTGATGCCTGATAGGGCAACCCATGTGACTACAAAAGTTAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCTATGTTAGATGAAGCAAATGAGAGTTGTGATGTCTACAGTTTGGGCATTCTCCTTCTAGAACTTGCCAGTGGCAAAAGGCCGATTGAAAAGCTTAGTTCCACGGTGAGGCGATCTATAGTTGATTGGGCAATGCCATTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATAGTAAGTATGTGGAGGGAGAACTCAAAAGAGTAGTTTTAGTTGCACTTATGTGTGCCCAGGATCTACCTGAGAAGAGACCGACCATGCTTGATGTGGTAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTATCATATAGAGAACAGTGAAATATTCAAAAGCCCTCTAGCTGTCGACAGCAATGACGGGACATCAGTGGCTGAAGACTATATCTCAGAAGAAAAAGAACTAGAACGTCCGTTGAAAGAGAATACTGAGCTATGAAATAACGATTCCGAAAAAGAAAGGAAAAAAACTATGAGCTTGAGGAGTTAAATATGGGTTGTGAAGATTTTTTCTTGTTGTTGTTGTGGAACTTTGTAAGGCAACACTGGGTGCCCATCCGTTAGATTAGCATGGATATGTTTACTGTGATTGTATGAGTGCTTGGGGTTTGTGTAGTATTTTAGTCCCCCTGTGGCTACCAATTTGATATCTGCATCGTGTTTCACCCTTGCTCTATGCTATACTGCTATTAAGTTTTACCGACCAACGCC 1643 0.409 MQNLSLHSHLHGHHSFECLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKSSNVLLDSDFQARIADFGFAKLMPDRATHVTTKVKGTLGYLAPEYAMLDEANESCDVYSLGILLLELASGKRPIEKLSSTVRRSIVDWAMPLVCEKKFSEIADPRLNSKYVEGELKRVVLVALMCAQDLPEKRPTMLDVVELLKGESKDKFYHIENSEIFKSPLAVDSNDGTSVAEDYISEEKELERPLKENTEL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00493 248 FunFam PTI1-like tyrosine-protein kinase At3g15890 1 212 - -
Pste6g00493 248 Pfam Protein kinase domain 16 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00493 248 SUPERFAMILY Protein kinase-like (PK-like) 1 196 IPR011009 -
Pste6g00493 248 MobiDBLite consensus disorder prediction 229 248 - -
Pste6g00493 248 PANTHER OS01G0750732 PROTEIN 1 203 - -
Pste6g00493 248 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00493 248 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00493 248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Pste6g00493 248 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
Pste6g00493 248 MobiDBLite consensus disorder prediction 221 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00493 Pste-Chr6 1842822 1846043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00493 3 222 Trihelix Transcription Factor Family AT1G70460 44.196 3.68e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pste6g00493 Pkinase 3.8e-27 CL0016