Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00489 AATAAAATAAAATAAGAAAAAACCATTGTCGTTTATCCCATAACACTAAATTTTCTCTCCTCAAAGAAACTCAAAGTAAAAGCGTCTCAATTCGGAAAAAAAAAAAAAAAACTTCGAAGGTTTTTTCTGATTCCAATCCGTCGTCGTATTCTTCTCCCCCAAAACCAAACCCTTACGAATTGGTCTTTGTTTGAATCTCTTCAGAGGTTCCCTTTTCGGTGTTCGGAGCTGTTTCCGGATTCTAGGGTTTCGGATTTTGCGGCGGCGATGGCGCAGGCGGCGGGGCGGAGCAGGGTGGTCGGAGACTACGTCGTCGGGAAGCAAATCGGCGCGGGGTCGTTCTCGGTGGTGTGGCACGGAAGGCACAAGGTGCACGGAACCGAGGTGGCGATAAAGGAGATCGCCACGCTTCGTCTCAACAAGAAGTTGCAGGAGAGTCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCCAACATAATCGCTTTGCACGATATCATTCAGGTTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTCTCCTTGTACATTCAACGCCATGGAAGGGTAGCTGAAGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTACTGGTTTACAAGTTCTTCGGGATAATAATCTTATTCATCGAGATCTGAAACCACAGAACCTTCTTCTCTCCCGAAGTGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAGCTACAGAAGTATGATGCTAAGGCAGATCTTTGGAGTGTTGGTGCAATCTTATTTCAGTTTGTTACAGGAAGAACACCTTTCACTGGAAACAATCAAATACAGTTACTACAGAATATTATGAAATCAACAGAATTACAATTTCCATCTGATAGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGTTACGTCGGAATCCAGTGGAACGGCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTTCTCAAAAGCAAACAGAACAGGATGAGCCATTGAGGAATAGAAGTTCTTTAAGGCCAGTTGGTGGGTTTTGTTCTACAGCCTCGGACCCTTTGAGAAGAACTGAGGAAAACTATCAAGAAGATTGTTTGCCTTTCATCCTAGATGATGACTCTAGTGGTCCTGAGGGGAGTCCATCCTTTTCAAAGAAGTCCTCAATGAAGTCGACCTATGGATTTGAGCTAAATGCTAAAGTAGATAAAGCAGAGTCTGCATCTCCTATATCTGATAACATTAATTGTACTTCTGGATTTGGCAGTATGAACCAAAGATCTGAAAAAACTAATAAAAGATTGGATAACCATAAAATATCAAGAAATCTAACTGATCCTCTAGAATCTCCGGAACAAATATTCACAAGTCCTTATCCAAAAGTAACAGATTCCCTGGAGAATATTGATCAAGAATATGTTCTGGTGTCTGGGCCTCCTATAGATATTTCATCTTCTTCAGTGGGAGCTTCAAGGCCCAGCCATACCCCATATAGGTCAGGTAGTTTACCCCAAGAATCTTCTTGTACAATCACTAGATTAAGTGCTCCAATGCCAATAGTTGGTGTACCTGCCAATAGCGTATGCCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACTTCTCTTGGATCAATGGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTAAAATCATTGCAACAATGTGCATCCGCCATCACAGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTAGAAGCGTTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCGCTGCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGGCGGAGCACCAGTAGGAAGCATGGAAACACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTGATGGGTGAAATGGAAAGTGCAGCTGTATTATACTCAAAAGCTGTCCGACTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTCATTCTTAATCCTCCATTTTCACTGACAAACTCAGACCGTTACCGGCTTCGCAATTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGATCCCAGCGAATGACACTAGTGAAATGTGATGACAGTCGAGGTATTCTTCAGGAAAAGTTTTAGCAATCGTTGTTTGTTTCCCATTCCACACAACAAATTATTTATTTGTACAGTTATTCTTTGATGGGAGGGGGAATTGGGGATGCTGATGGGAGTAAACCAGCACAATATAGGTTGTAAAATTCAACATTTCCGTGATTAGAATGATGATCAAATGTGCATTTGATTATGTATGCTGTCTCATTTGCCCCG 2523 0.4237 MAQAAGRSRVVGDYVVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIIALHDIIQVPGKIHLVLEYCKGGDLSLYIQRHGRVAEATAKHFMQQLATGLQVLRDNNLIHRDLKPQNLLLSRSDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQFVTGRTPFTGNNQIQLLQNIMKSTELQFPSDSPSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQTEQDEPLRNRSSLRPVGGFCSTASDPLRRTEENYQEDCLPFILDDDSSGPEGSPSFSKKSSMKSTYGFELNAKVDKAESASPISDNINCTSGFGSMNQRSEKTNKRLDNHKISRNLTDPLESPEQIFTSPYPKVTDSLENIDQEYVLVSGPPIDISSSSVGASRPSHTPYRSGSLPQESSCTITRLSAPMPIVGVPANSVCQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQCASAITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSRKHGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAVLYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLVKCDDSRGILQEKF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00489 688 Pfam Protein kinase domain 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00489 688 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Pste6g00489 688 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00489 688 SUPERFAMILY Protein kinase-like (PK-like) 10 272 IPR011009 -
Pste6g00489 688 MobiDBLite consensus disorder prediction 432 452 - -
Pste6g00489 688 FunFam Aurora kinase A 7 96 - -
Pste6g00489 688 MobiDBLite consensus disorder prediction 479 498 - -
Pste6g00489 688 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Pste6g00489 688 CDD STKc_ATG1_ULK_like 20 270 - -
Pste6g00489 688 Gene3D Transferase(Phosphotransferase) domain 1 5 310 - -
Pste6g00489 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pste6g00489 688 MobiDBLite consensus disorder prediction 559 587 - -
Pste6g00489 688 MobiDBLite consensus disorder prediction 479 502 - -
Pste6g00489 688 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00489 688 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 572 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00489 Pste-Chr6 1824553 1840876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00489 10 278 CBL-interacting serine-threonine protein kinases AT2G30360 36.727 8.71e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pste6g00489 Pkinase 6.4e-71 CL0016