Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g00453 | GACTTCGCTGGGAAAAATGACATGGTCTTTTGTGGCGTGTTTGATGGTCATGGTCCTCTAGGACACAAGTTTGCACGATGTATACGTGACAATCTACCCTCAAAACTCTCAAAATCAATCAAACAATTACAAGAAAAGGTCTGCAAACAATGTTCTACTAATGCTACAGATGGTAGTAGTCATAGTAATGACAATGTTGAGGATGACCAAAACATGTCATTTGCTTCATGTGAAGAAATCTTTATGAGGTGCTTTAGTGAAATGGATGAAAACCTTGCTAAGAAAATTGACGCCGATGGATTTCGTGGCGGTAGCACTGCTGTGACTTTAATCAAACAGGGTAACCAATTAATAATGGGCAATTTGGGGGATTCTCGTGTAGTTCTTTGTAGAAGAACAAATGACAATCATCTTGTTCCAGTTCAACTTACTATTGACTTGACCCCAGATATTCCATGTGAAGCTTTGAGAATCATTAACTGTGGAGGTAGAATTTTTGCTACAAAACAGGATCCAAGTGTTACCAGAGTATGGACGCCTAAAAGGGATAGTCCTGGACTAGCTATGTCAAGAGCCTTTGGAAATTTTTTCCTAAAAGACCATGGTGTCTCCTCAGTCCCTGATGTATCATACAGAAAACTTACCAAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGGTAAGCATTTTCATACTAGAATGTCAACTTTGA | 714 | 0.395 | DFAGKNDMVFCGVFDGHGPLGHKFARCIRDNLPSKLSKSIKQLQEKVCKQCSTNATDGSSHSNDNVEDDQNMSFASCEEIFMRCFSEMDENLAKKIDADGFRGGSTAVTLIKQGNQLIMGNLGDSRVVLCRRTNDNHLVPVQLTIDLTPDIPCEALRIINCGGRIFATKQDPSVTRVWTPKRDSPGLAMSRAFGNFFLKDHGVSSVPDVSYRKLTKQDEFVVLASDGVSIFILECQL | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g00453 | 237 | SMART | PP2C_4 | 1 | 233 | IPR001932 | - | |
| Pste6g00453 | 237 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 237 | IPR001932 | - | |
| Pste6g00453 | 237 | Gene3D | - | 1 | 232 | IPR036457 | - | |
| Pste6g00453 | 237 | PANTHER | PROTEIN PHOSPHATASE | 9 | 228 | IPR015655 | GO:0004722|GO:0006470 | |
| Pste6g00453 | 237 | Pfam | Protein phosphatase 2C | 37 | 228 | IPR001932 | - | |
| Pste6g00453 | 237 | CDD | PP2Cc | 6 | 229 | IPR001932 | - | |
| Pste6g00453 | 237 | SUPERFAMILY | PP2C-like | 5 | 228 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g00453 | Pste-Chr6 | 1702165 | 1703294 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g00453 | 1 | 236 | PP2C-type Phosphatase Gene Family | AT5G36250 | 49.206 | 2.45e-75 | 230 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste5g01995 | 5 | 12680000 | 12682138 | Pste6g00453 | 6 | 1702165 | 1703294 | PCT |