Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00442 ATACATATAGTGCATCATTACCTCTCTTTTTGTCTCCTCAATTTCAGACCCAACATAAACCTTTTTCATACCTTAGTTCTTGACCATGTCTTTCAGTTTCACTGACCTTCTCTTTAACAACACTAACTTAACCATGGATGATGATCCTTTTGGACTTGAATTTTCTGATAACTTCAAGTCAGCTTCACCTCTCTCACTGCCTTTCTCCCCTTCGTCAATCTACCCTCCTTTTACTGAGTTCCCTCCTGGTTTTGACCCCACAACAACACAGTCATTGAATTCACCCTTCTTGTTTTCTTCTTCTCAGAATGTACCTGTATCTTACACAACTGAGCCATCTTCTAGCATGAGCTTCAGCATGAGAAACAGTTCAACTGACGTTCAACGAGGTAACAAGCAGGAAGAGAGAAATTACTCTGACCTCTCTTTCCTAACAAAAACAAGCCACGTGCCTATCTTTCAATCTGCTACAAGCTTGTTTCAAATGCAGGATCCGCAAAAGAAACAAGACACATTGATATTCAGTGAAGCTGCAAAGCAAACAGATTTCTCATCTGAGATAACAGCATCAAAATCTGAATATCCATCCACTCAGGGCTTCTCCACAGAAATGGCCTCAAGCAAACATGAAAAGCAAAGCAATTCTGGTGCTGGATCTGTTCCTTTTAACTCCACTAATGCTCCTAAGTCTATTAGAGAACAAAGAAAATCTGAAGATGGATACAATTGGAGGAAGTATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCGCGCAGTTATTACAAGTGCACGCATCCGAGTTGCCCAACAAAGAAGAAAGTTGAGAGGTCTTTGGAGGGATATATCACTGAAATAGTGTACAAGGGAAGTCACAATCATTCCAAGCCACATCCTAAGAAAAATAGTTCTCAATCATTTCATCAAACTTCTTCATCCTGCACCAACTCAGGTATTTCTGATCAATCTGTGGGAGAGGAAGATGTTGAGCAAACATCACAAACTAGTTATTCTAGAGAGGGTGATGATGATCTTGCACCCAAGGCCAAAAGATGGAAGGGGGAGAATGAAAATGATGGTCATTCCTATTCCTCTGCTGGGAATAGAACTGTTAGGGAACCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGACATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAACCCAAACCCAAGGAGTTACTACAAATGTGTTGCCCTTGGTTGTCCAGTGAGAAAACATGTTGAGAGAGCTGCACATGACATGAAAGCTGTGATTACAACTTATGAAGGGAAACATAACCATGATGTACCTTTAGGACGAGGACACTCAAGCTATAACATGAACAAAACTTCTCTAAAGGAAATCAACACCACCACCACCAGCAATGTAGCAGCTCCTGCCCCTATAAGGCCCTCACCACTGACTAATTATTCTAACTCTGCAAGTTTCACCAATTCATTCCGTGACACAAAGCCACCAACATCTTCAAGTCAACAACCTTTTCCAATGGACCTGATGCTGAGCCCTGGAAGCCTTGGATTTTCTGCTAATGACTCTATCCTTCAGTCCTTTTTGTCAAAGAACTTCTAAATTTGGAACTAAAACACCAGAACTTTACACATAGTGTTATCGTTGATATGCTTATGTATAGCATATAGGAATAGTAGAATAATAAAATCATAGACATCTACTAATTTTAGTGGACTAAGATTAGAGACTAGAACTACAGAATTTAGCAATAGGGGAGACAGAAAATATGTTGACCTCGAATTCTATTATTCTTTTGTTTTGTTTAGCACAAACAAATAGAAGTTTTCTTTGGCTGAGTCTTACTACTTTCAATTGCTTTCTAAGGTTTATACTTTATAATAGTGTTAGCAATTTCTACTCTGG 1921 0.3925 MSFSFTDLLFNNTNLTMDDDPFGLEFSDNFKSASPLSLPFSPSSIYPPFTEFPPGFDPTTTQSLNSPFLFSSSQNVPVSYTTEPSSSMSFSMRNSSTDVQRGNKQEERNYSDLSFLTKTSHVPIFQSATSLFQMQDPQKKQDTLIFSEAAKQTDFSSEITASKSEYPSTQGFSTEMASSKHEKQSNSGAGSVPFNSTNAPKSIREQRKSEDGYNWRKYGEKQVKGSENPRSYYKCTHPSCPTKKKVERSLEGYITEIVYKGSHNHSKPHPKKNSSQSFHQTSSSCTNSGISDQSVGEEDVEQTSQTSYSREGDDDLAPKAKRWKGENENDGHSYSSAGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVALGCPVRKHVERAAHDMKAVITTYEGKHNHDVPLGRGHSSYNMNKTSLKEINTTTTSNVAAPAPIRPSPLTNYSNSASFTNSFRDTKPPTSSSQQPFPMDLMLSPGSLGFSANDSILQSFLSKNF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00442 510 MobiDBLite consensus disorder prediction 312 329 - -
Pste6g00442 510 FunFam WRKY transcription factor 197 269 - -
Pste6g00442 510 Gene3D WRKY domain 342 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 Gene3D WRKY domain 196 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 MobiDBLite consensus disorder prediction 273 311 - -
Pste6g00442 510 ProSiteProfiles WRKY domain profile. 353 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 Pfam WRKY DNA -binding domain 359 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 Pfam WRKY DNA -binding domain 210 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 440 IPR044810 GO:0003700
Pste6g00442 510 SMART WRKY_cls 209 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 SMART WRKY_cls 358 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 MobiDBLite consensus disorder prediction 330 345 - -
Pste6g00442 510 MobiDBLite consensus disorder prediction 156 202 - -
Pste6g00442 510 MobiDBLite consensus disorder prediction 260 345 - -
Pste6g00442 510 MobiDBLite consensus disorder prediction 83 99 - -
Pste6g00442 510 SUPERFAMILY WRKY DNA-binding domain 206 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 MobiDBLite consensus disorder prediction 83 109 - -
Pste6g00442 510 MobiDBLite consensus disorder prediction 156 242 - -
Pste6g00442 510 ProSiteProfiles WRKY domain profile. 210 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00442 510 MobiDBLite consensus disorder prediction 203 224 - -
Pste6g00442 510 FunFam WRKY transcription factor 33 345 411 - -
Pste6g00442 510 SUPERFAMILY WRKY DNA-binding domain 350 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00442 Pste-Chr6 1658626 1662353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00442 204 487 WRKY Transcription Factor Family AT2G38470 54.603 1.30e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste6g00442 WRKY 2.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01988 5 12600695 12603652 Pste6g00442 6 1658626 1662353 PCT