Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00441 CTCACATTAACAGTTATTCCCCAAACCAACTCAACAAAGAAAGCAAAAAACTTTTCCTTCTCTATTCAGAGATCATCCAAAACGACAACGCTCGAAAGCAAAACGCAGCAGCGCGATGAAGAAGCAGAAGCGCGCGCAGCAGCAAAACGACACGAACCCTTTCGAGTTGCTGTCGGAGGAGCTAATGTTCGTGATTCTGGACTTTCTCGAAACGGCGCCGTTGGACGTGAAATCGTTCTCGCTGACGTGTAAGCGGTTTTATTGTGCGGAGGCGAAGCACCGTCGGTTGCTGAGACCGTTGCGGGCAGAGCACCTGCCCGCGCTCGCTGCCCGGTACCCTGCAGTCACGGACTTGGATCTCTCGCTCTGCCCGCGCGTGGGCGACGGCGCGCTCGCGTTCGTGGCGGGCGCGTACGCGGCCACGCTGCGGCGGCTCGACCTGTCGCGGTCGCGGTGGTTCACGGCGAGCGGGCTGGGGAGCGTGGGAGCCGGTTGCGGGAACTTGGTGGAGCTTGACCTGTCGAACGCGACGGAGCTGAGGGACGCCGGGGCGGCGGCGGTGGCGCGTGCGAGGAACTTGAGGAAATTGTGGCTGGCGAGGTGTAAGTTGGTGACGGATATGGGGATTGGGTGTATTGCGGTGGGTTGTAGGAAACTGAGGTTCATTTGTTTGAAGTGGTGTGTGGGAATTGGGGATTTGGGTGTGGATTTGGTTGCAATTAAGTGTAAGGAGCTTACATCATTGGATCTCTCTTATTTGCCTGTAGTTTCTCTAGAGATGGTTTTGTTTGAGATGGATGAGATGTTTGCTTTGTTCATGCTGAAGATCACAGAGAAATGTCTGCCATCAATCTTCAAATTGCAACATCTTGAAGATCTGGTCCTTGAAGGATGCTTTGGCATTGATGATGACAGTCTCGAGGTTGATCTCTTAAAACAAGGGTGCAAGACATTGAAGAAACTTGATATCTCAGGTTGTCAAAACATAAGTCACATCGGGTTATCAAAGCTAACAAGTGTTTCTGGAGGTTTAGAGAAACTCATTTTGGCAGATGGTTCTCCTGTCACCCTTTCTCTTACTGATGATTTGAGTAAACTTTCGATGTTGCAATCAATTGTATTAGATGGATGCCCGGTTACTTCTGAGGGACTAAGGGCCATTGGAAATCTGTGCATTTCACTTAGGGAGCTGAGTCTAAGCAAATGTTTGGGAGTGACAGACGAAGCTCTCTCATTCCTTGTGTCAAAGCACAAAGATTTAAGGAAGCTTGACATCACATGTTGTCGTAAGATAACTGATGGCTCCATTGCCAGCATAGCAAATTCATGCACAAGTCTCACTTCTCTCAAAATGGAGTCATGTACACTAGTTTCACAAGAAGCGTTTGTCTTGATTGGACATAAATGCTATTATCTTGAGGAGCTTGACCTAACAGACAATGAAATTGATGATGAAGGTCTTATGTCCATCTCGTCTTGTTCTAGGCTCTCCAGCTTGAAAATAGGAATCTGCATGAACATAACTGACAGAGGACTTACCTATGTTGGCATGCGTTGCCCAAGATTAAAGGAGCTGGACCTGTACAGGTCTACAGGAATAACTGATTTGGGCATTTCAGCAATTGCTTGTGGATGCCCAGGTCTTGAGATGATAAATACGTCCTATTGTACTAGCATCACAGACAAGGCACTATTCTCGTTGTCAAAATGTTCAAATTTGAAGATACTTGAAATTCGTGGATGTCTTCTTGTTGCATCTATAGGTCTGGCAGCTATTGCAATGAATTGCAGACAACTAAGCCGTCTAGACATAAAGAAGTGCTACAACATTGATGATAGTGGGATGATTCCACTTGCTCATTTCTCCCAAAATTTAAGACAGATAAATTTGTCATATAGCTCAGTCACAGATGTGGGACTTCTGTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACAGTGCTTCACCTGCAAGGCTTGGTTCCAGGAGGGCTGGCTGCAGCTTTATTAGCATGTGGAGGGCTCACAAAAGTGAAGCTTCATCTTTCACTACGATCTCTGTTACCGGAGCTACTTATCAGACACGTAGAAGCACGTGGCTGTGTGTTTGAATGGAGAGATAAAGAATTTCAGGCTGAATTGGACCCCAAGTGTTGGAAGTTACAGTTAGAAGATGTGATGCAATAGGATTTTCTTCTCAGGTTGTTTGGACTTTTTTGGAGTTTGATAGAAGACAACTTGGACATGGCTTGTGAACTATAAATTATAGAATAATAACGCATGTCTCGGATAACATCCACTTCTGTCTACTCTGTCCACCCACCTATACTACAAGAAATGTCAGAACTCAGAAGTCAGAAGTATTGTGCTTAGTCCATTGGGAATGGTGGAGGTGGCAAATTATCCTTCCGCAAGTCTCGTCTAACTACAAAGTGTATATGGTTTGGTTTTCAATTTTCCCAAAATCAATTCTAAAACCATGTTGAAGTCCAAAGTAACAAATAGTTGCTTCAACTTGTTCAATCTTCACCATGATTTTATGAGGTACCCAAACACATTAGTTTTGGACTCTGTTGAAACTCAAGTAATTACGTTGTGCATAGCAAGCAGGGGCAATTGCTTGAGCGATAGGGGGTAATCTAGTGTATAAAAAGTAAACTTTTTTTAAGTAAAAGTGTATACAAATTTATCTAACTATTTTCAATTTTTTTTTTTTATTTTTTAGTGGAAAACAATTCTCAATGTTGAGAAAAAGGAAAAGGAGATATTTATGTATAATTTTTTTTC 2788 0.4408 MKKQKRAQQQNDTNPFELLSEELMFVILDFLETAPLDVKSFSLTCKRFYCAEAKHRRLLRPLRAEHLPALAARYPAVTDLDLSLCPRVGDGALAFVAGAYAATLRRLDLSRSRWFTASGLGSVGAGCGNLVELDLSNATELRDAGAAAVARARNLRKLWLARCKLVTDMGIGCIAVGCRKLRFICLKWCVGIGDLGVDLVAIKCKELTSLDLSYLPVVSLEMVLFEMDEMFALFMLKITEKCLPSIFKLQHLEDLVLEGCFGIDDDSLEVDLLKQGCKTLKKLDISGCQNISHIGLSKLTSVSGGLEKLILADGSPVTLSLTDDLSKLSMLQSIVLDGCPVTSEGLRAIGNLCISLRELSLSKCLGVTDEALSFLVSKHKDLRKLDITCCRKITDGSIASIANSCTSLTSLKMESCTLVSQEAFVLIGHKCYYLEELDLTDNEIDDEGLMSISSCSRLSSLKIGICMNITDRGLTYVGMRCPRLKELDLYRSTGITDLGISAIACGCPGLEMINTSYCTSITDKALFSLSKCSNLKILEIRGCLLVASIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLASISCLQSFTVLHLQGLVPGGLAAALLACGGLTKVKLHLSLRSLLPELLIRHVEARGCVFEWRDKEFQAELDPKCWKLQLEDVMQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00441 690 PANTHER UNCHARACTERIZED 550 642 - -
Pste6g00441 690 SUPERFAMILY L domain-like 74 260 - -
Pste6g00441 690 SUPERFAMILY F-box domain 9 69 IPR036047 GO:0005515
Pste6g00441 690 SUPERFAMILY RNI-like 106 544 - -
Pste6g00441 690 Gene3D Ribonuclease Inhibitor 230 320 IPR032675 -
Pste6g00441 690 Gene3D Ribonuclease Inhibitor 9 224 IPR032675 -
Pste6g00441 690 FunFam F-box/LRR-repeat protein 3 427 666 - -
Pste6g00441 690 FunFam F-box/LRR-repeat protein 3 isoform A 318 423 - -
Pste6g00441 690 Gene3D Ribonuclease Inhibitor 321 424 IPR032675 -
Pste6g00441 690 SMART LRR_CC_2 74 99 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 379 404 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 481 506 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 277 302 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 353 378 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 178 203 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 153 177 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 101 126 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 584 608 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 405 430 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 456 480 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 507 532 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 431 455 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 533 557 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 127 152 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 249 275 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 558 583 IPR006553 -
Pste6g00441 690 SMART LRR_CC_2 328 352 IPR006553 -
Pste6g00441 690 Pfam Leucine Rich repeat 381 402 IPR001611 GO:0005515
Pste6g00441 690 Pfam Leucine Rich repeat 481 504 IPR001611 GO:0005515
Pste6g00441 690 Pfam Leucine Rich repeat 277 299 IPR001611 GO:0005515
Pste6g00441 690 Pfam Leucine Rich repeat 433 453 IPR001611 GO:0005515
Pste6g00441 690 Pfam Leucine Rich repeat 584 606 IPR001611 GO:0005515
Pste6g00441 690 Gene3D Ribonuclease Inhibitor 425 676 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00441 Pste-Chr6 1645246 1650368 Dispersed