LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g00435	GAAGTCTGAACCACAGCTATGGAACTTCTGCAAAATGGCCACCACAAACCTTTCGTCAGCACCAAACCCACCACCGAGTCACCACTCGCCAATGGAACCGCGTTAACTCAGCTCACCTCGCTCTTCGAAACTCAGTTCTTGGCCAACATAGATCCTTCCAGAGCCTTTGTCACCAAAGTGAAGCGTCTCATTGTAAAGGTTGGAACAGCTGTTGTTACTCGGAGTGATGGAAGATTAGCATTGGGCAGAATTGGAGCACTGTGTGAGCAGCTTAAAGAACTTAGCACTCAAGGGTTTGAAGTGATATTGGTAACTTCAGGTGCTGTTGGTCTTGGCAAGCAAAGACTTAGATATCGCAAATTGGCCAATAGCAGCTTTTCTGATCTTCAAAAGCCACAAGGTGAGCTTGATGGAAAAGCATGTGCGGCTGTAGGGCAGAGTAGTCTCATGGCTCTCTATGATACAATGTTCAGCCAGCTTGATGTGACTTCTTCCCAACTTCTAGTGAATGATGGGTTTTTCAGAGATTCTGGCTTCAGAAAACAACTTTCGGACACAGTGAACTCATTGTTAGATTTAAGGGTTATCCCCATTTTCAATGAAAACGACGCTGTTAGTACTAGGAAGGCACCATATGAGGATTCTTCTGGTATATTCTGGGACAATGACAGTTTGGCTGGTCTATTGGCCCTTGAACTTAAAGCTGATCTCCTTGTTTTATTGAGTGATGTTGAGGGTCTTTATAGTGGTCCTCCAAGTGACCCAAACTCAAAGTTGATCCATACATATGTAAAAGAGAAACATCAAGGGGAAATTACTTTTGGAGACAAGTCAAGATTAGGCAGAGGGGGTATGACTGCTAAAGTTAATGCTGCTGTTTGTGCTGCGCATGCTGGTATCCCGGTCATTATAACTAGTGGCTATGCTACAAACAATATCATACGGGTGCTTCAAGGGGAGAGAATCGGCACTGTCTTTCATAAAGATGCACATCTATGGACCAATTTAAAGGAGGTGAGTGCTCGTGAAATGGCAGTTGCAGCACGTGAGGGTTCTAGACAACTTCAGATCCTCAAATCTGAAGAAAGGAGGAAAATACTTCTGGCAGTGGCTGATGCATTGGAGAAAAACGAAAGTACGATAAGGCGTGAGAATGAGGCTGATGTTGCTGATGCTATCTCTAGTCTTGCAAAGTCTGTGCGCATGCTTGCAGATATGGAAGAACCAATTGGTCAAATTTTAAAAAGAACCGAGCTAGCAGATAAACTCATCCTGGAGAAAATGTCATGTCCTTTGGGTGTCCTTCTGATTATATTTGAGTCTCGACCTGATGCCCTTGTTCAGATAGCCGCATTGGCAATCCGAAGTGGGAATGGTTTACTGCTTAAAGGTGGAAAGGAAGCCAGACGATCGAATGCAATCTTACACAAGGTCATTACTTCAGTTATGCCAGATACTGTTGGTGACAGACTTATTGGGCTTGTGACTTCAAGAGATGAAATTCCAGACCTACTTAAGCTTGATGATGTGATAGATCTAGTGGTCCCTAGAGGCAGCAATAAGCTTGTTTCTCAAATCAAGGAATCAACAAAAATTCCTGTTCTTGGTCATGCTGATGGAATTTGTCATGTATATGTTGACAAATCTGCTAATATTGATATGGCAAAGCATATTGTTAGGGATGCAAAGACTGATTATCCAGCAGCTTGTAATGCAATGGAAACTCTTCTTGTACACAAGGATCTGTCAAATAATGGTGGACTTAATGAGCTTATCCTTGAACTCCAACGTGAAGGTGTTAAATTGTATGGTGGACCAAGAGCCAGTAGCTTACTGAACGTTTCAGAAACAAACAATTTTCATCATGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTAGAAGATGTATTTGCTGCCATTGACCACATAAATCAACATGGAAGGCATGTTGGTTCTCATACTGAATGCATTGTTACTGAAGATTGTGAAGTTGCTGAGACTTTCTTAAGTCAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGTACACGGTTTTGTGATGGAGCACGTTTTGGTCTTGGTGCAGAGGTTGGAATTAGTACAAGTCGAATTCATGCTCGAGGTCCTGTAGGAGTTGAGGGCTTGTTGACAAACAGATGGATATTGAGAGGGAGTGGCCATGTGGTTGATGGTGATCAAGCGATCAATTACACTTACAAGGAGCTGCCACTAAAAGCATAACTTTGCATGCAGAACTTAGTTCACATTCAAGCTAATATGCTCACCTCAACAAAGCAAGCATCTCTTTTCTGTTCTGTTCTGCTCTGTTATGATATGCAGAAGTTGCTGAGATGCTGGCCATGTATAATCGTAGCTTTCACTTGACCCTTTCCAGTGCCTTTTTCTTACCTGGAGCAAGGGGGGAGAAAATAATCATAGGAGTGTTACTGTTTGATTATATTGCACTTTGGTGCTCTTTTATAACATATTCCCAGTTTGTAAAACAGCAATGCTGTGACAGTTATAAATATATTCACTACATACTAGTGAGCTTGAATAATTATTCTGGAGAAGTTAGTGATTAGTATAGAGAATCTTATTTGTTTTATGCTGAATTATTGTTAGTCAAGTGCTGATTTTGCTCTGATATATCAGT	2659	0.4163	MELLQNGHHKPFVSTKPTTESPLANGTALTQLTSLFETQFLANIDPSRAFVTKVKRLIVKVGTAVVTRSDGRLALGRIGALCEQLKELSTQGFEVILVTSGAVGLGKQRLRYRKLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDSGFRKQLSDTVNSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYVKEKHQGEITFGDKSRLGRGGMTAKVNAAVCAAHAGIPVIITSGYATNNIIRVLQGERIGTVFHKDAHLWTNLKEVSAREMAVAAREGSRQLQILKSEERRKILLAVADALEKNESTIRRENEADVADAISSLAKSVRMLADMEEPIGQILKRTELADKLILEKMSCPLGVLLIIFESRPDALVQIAALAIRSGNGLLLKGGKEARRSNAILHKVITSVMPDTVGDRLIGLVTSRDEIPDLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANIDMAKHIVRDAKTDYPAACNAMETLLVHKDLSNNGGLNELILELQREGVKLYGGPRASSLLNVSETNNFHHEYSSLACTVEIVEDVFAAIDHINQHGRHVGSHTECIVTEDCEVAETFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDQAINYTYKELPLKA	741

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pste6g00435	741	Hamap	Gamma-glutamyl phosphate reductase [proA].	334	724	IPR000965	GO:0004350\|GO:0006561
Pste6g00435	741	Hamap	Glutamate 5-kinase [proB].	55	324	IPR005715	GO:0005737\|GO:0006561
Pste6g00435	741	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	533	682	IPR016163	GO:0016620
Pste6g00435	741	FunFam	Delta-1-pyrroline-5-carboxylate synthase	44	327	-	-
Pste6g00435	741	NCBIfam	delta l-pyrroline-5-carboxylate synthetase	48	740	IPR005766	GO:0003824\|GO:0006561
Pste6g00435	741	SUPERFAMILY	ALDH-like	336	723	IPR016161	GO:0016491
Pste6g00435	741	Pfam	Amino acid kinase family	55	300	IPR001048	-
Pste6g00435	741	ProSitePatterns	Glutamate 5-kinase signature.	272	289	IPR019797	GO:0004349\|GO:0006561
Pste6g00435	741	PANTHER	GLUTAMATE SEMIALDEHYDE DEHYDROGENASE	44	739	-	-
Pste6g00435	741	PIRSF	P5C_synthetase	6	741	IPR005766	GO:0003824\|GO:0006561
Pste6g00435	741	NCBIfam	glutamate-5-semialdehyde dehydrogenase	342	713	IPR000965	GO:0004350\|GO:0006561
Pste6g00435	741	CDD	ALDH_F18-19_ProA-GPR	336	720	IPR000965	GO:0004350\|GO:0006561
Pste6g00435	741	CDD	AAK_P5CS_ProBA	47	321	IPR041744	-
Pste6g00435	741	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	343	722	IPR016162	GO:0016491
Pste6g00435	741	FunFam	Delta-1-pyrroline-5-carboxylate synthase	533	682	-	-
Pste6g00435	741	NCBIfam	glutamate 5-kinase	55	330	IPR005715	GO:0005737\|GO:0006561
Pste6g00435	741	Pfam	Aldehyde dehydrogenase family	332	576	IPR015590	GO:0016491
Pste6g00435	741	MobiDBLite	consensus disorder prediction	1	23	-	-
Pste6g00435	741	Gene3D	-	45	327	IPR036393	-
Pste6g00435	741	PRINTS	Glutamate 5-kinase family signature	274	294	IPR001057	GO:0005524\|GO:0016301
Pste6g00435	741	PRINTS	Glutamate 5-kinase family signature	215	242	IPR001057	GO:0005524\|GO:0016301
Pste6g00435	741	PRINTS	Glutamate 5-kinase family signature	92	106	IPR001057	GO:0005524\|GO:0016301
Pste6g00435	741	PRINTS	Glutamate 5-kinase family signature	176	197	IPR001057	GO:0005524\|GO:0016301
Pste6g00435	741	PRINTS	Glutamate 5-kinase family signature	136	164	IPR001057	GO:0005524\|GO:0016301
Pste6g00435	741	SUPERFAMILY	Carbamate kinase-like	55	320	IPR036393	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g00435	Pste-Chr6	1584302	1599160	Transposed