Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00433 ATGGCTGAGAAAGGAAACATGGCGAACCAACTGCGCCACCAAGATTCTCTAGCAGAGCAATCACAAATTCAGACATTGGCTAATTATCCACTTATGGAGGAATCAGGGGAAAATTGGCCTTCGGATTCTTATTTGGATGATGTCAACGATTCATGTTTTGACGATGAAGAATTGGGCACTGATGATGATGATCCAGATTCTTTTTCTCAGGCCGTAGATCCCACCGACAGAAAGCGGAGACAGCGCGAACTCACCGAGAGGTTCCATGCACTTTCAGCTACCATTCCTGGCTCCAAAAAGATGGACAAGAGTTCGATCCTGGCGAATGCGAGCAGCTATGTGAAAGAGCTTGAGCAACGAGTGAGAGAGCTGGAGCAAGAAGTTGAATCCAGCAATATGGAAGTGAACTCCAATGAATATTGCTGTGGGCCAAATGAAATTGTTCCCGAGATCAAAGTCAGAGCGTTACAAAACGACGTGCTTATCATTATCCACTGTGAGAAACAAAAGGGCATCATGCTCAAAATACTTTCCCATCTCGAAAATCTTCATCTCTCTGTAGTCAACAGCAGCGTCTTGCGATTTGGCAAATCCACTCTCGACATCACCATTATTGCTCAGATGGGTGACGGATACAACCTCACGCTGGATCAACTTGTCAAGACCATCAGACTAGCCATCTTCTCTCATTAGCCCCTGCTATGCTAAGCCTATTGTACGTGGAGACAGAAGCAGGAAAGGGGAAAGGACCAAGCAGGAAAACAAAAACAGTTTTTTTTTTTTTTAAAGAATTCAGTGTAGACATTTGCACTTTAGTCCCGC 822 0.4465 MAEKGNMANQLRHQDSLAEQSQIQTLANYPLMEESGENWPSDSYLDDVNDSCFDDEELGTDDDDPDSFSQAVDPTDRKRRQRELTERFHALSATIPGSKKMDKSSILANASSYVKELEQRVRELEQEVESSNMEVNSNEYCCGPNEIVPEIKVRALQNDVLIIIHCEKQKGIMLKILSHLENLHLSVVNSSVLRFGKSTLDITIIAQMGDGYNLTLDQLVKTIRLAIFSH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00433 230 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
Pste6g00433 230 MobiDBLite consensus disorder prediction 1 80 - -
Pste6g00433 230 MobiDBLite consensus disorder prediction 9 31 - -
Pste6g00433 230 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 140 IPR036638 GO:0046983
Pste6g00433 230 Gene3D - 74 140 IPR036638 GO:0046983
Pste6g00433 230 MobiDBLite consensus disorder prediction 48 69 - -
Pste6g00433 230 Coils Coil 107 134 - -
Pste6g00433 230 Pfam Helix-loop-helix DNA-binding domain 78 118 IPR011598 GO:0046983
Pste6g00433 230 SMART finulus 75 123 IPR011598 GO:0046983
Pste6g00433 230 PANTHER BHLH TRANSCRIPTION FACTOR 76 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00433 Pste-Chr6 1579764 1587375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00433 75 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.444 3.75e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste6g00433 HLH 1.1e-05 No_clan