Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00422 ATGCCTGAGAAACCCCTTCAAGGGGTTCCCATTCTTTCCAGAGAAAGCAGCTTTTCATCTTCACCTAGAAGGTTGGACGGCAAGGTTGCTATTGTAACCGGTGGAGCAAGAGGAATTGGAGAAGCAACTGTGCGAGTTTTTGTGAAGAACGGTGCAAGGGTTGTGATAGCTGATGTTGAGGATGCACTTGGCACAATGCTAGCTGAGACATTAGCCCCATCAGCCACCTATGTGCACTGTGATGTCAGCATAGAAGAAGAAGTTGAAAATTTGGTGAGTTCCACAATTTCTCGCTATGGCCAACTAGACATAATGTTCAACAATGCTGGAGTGCTAGGGAACCAGTCCAAGAGCAAGAGCATAATGAACTTTGATCCTGAAGAGTTTGATAGGGTGATGCGTGTGAATGTGAAGGGCATGGCCTTGGGGATCAAGCATGCTGCAAGGGCCATGATTCCTAGGGGAATTGGGTGCATAATTTCCACTGCCAGTGTTGCTGGGGTCATGGGGGGGCTAGGGCCACATGCTTACACAGCCTCAAAGCATGCTATTGTGGGACTCACCAAGAACACTGCTTGTGAGTTGGGGAGATATGGGATAAGGGTCAATTGCATTTCACCATTTGGGGTGGCCACAAACATGCTTGTGAATGCTTGGAGAAGTGGTAGTGGTGATGAGGAGGGTGAGAATGATGATGAGGGGATCAATTTTGGGTTGCCCTTTCAAGAGGAAGTTGAGAAAATGGAAGAGTTTGTGAGAGCGCTTGCCACTTTGCAAGGAGCTACTCTAAGGGCCAAGGATATTGCTGAGGCTGCACTTTATCTTGCTAGTGATGAGTCCAAGTATGTTAGTGGTCATAATCTTGTTGTGGATGGTGGAGTCACCTCCTCAAGAAATTGCATTGGTTTGTAA 912 0.4726 MPEKPLQGVPILSRESSFSSSPRRLDGKVAIVTGGARGIGEATVRVFVKNGARVVIADVEDALGTMLAETLAPSATYVHCDVSIEEEVENLVSSTISRYGQLDIMFNNAGVLGNQSKSKSIMNFDPEEFDRVMRVNVKGMALGIKHAARAMIPRGIGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATNMLVNAWRSGSGDEEGENDDEGINFGLPFQEEVEKMEEFVRALATLQGATLRAKDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00422 303 CDD secoisolariciresinol-DH_like_SDR_c 25 295 IPR045309 GO:0016616
Pste6g00422 303 Pfam short chain dehydrogenase 28 217 IPR002347 -
Pste6g00422 303 MobiDBLite consensus disorder prediction 1 22 - -
Pste6g00422 303 Gene3D - 14 301 - -
Pste6g00422 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 IPR002347 -
Pste6g00422 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 IPR002347 -
Pste6g00422 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 IPR002347 -
Pste6g00422 303 FunFam Short-chain dehydrogenase reductase 15 299 - -
Pste6g00422 303 PRINTS Glucose/ribitol dehydrogenase family signature 177 196 IPR002347 -
Pste6g00422 303 PRINTS Glucose/ribitol dehydrogenase family signature 258 278 IPR002347 -
Pste6g00422 303 PRINTS Glucose/ribitol dehydrogenase family signature 29 46 IPR002347 -
Pste6g00422 303 PRINTS Glucose/ribitol dehydrogenase family signature 198 215 IPR002347 -
Pste6g00422 303 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Pste6g00422 303 PRINTS Glucose/ribitol dehydrogenase family signature 100 111 IPR002347 -
Pste6g00422 303 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 21 298 - -
Pste6g00422 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 295 IPR036291 -
Pste6g00422 303 Pfam Enoyl-(Acyl carrier protein) reductase 245 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00422 Pste-Chr6 1520291 1521941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00422 25 295 Acyl Lipid Metabolism Gene Families AT1G63380 31.206 1.03e-24 99.0