Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00417 GCAAAAATGTAATTAATAACAAAGGATAGAAATTAGAATAGAATAGGGGTGGTTCTGGGTAGGGAAGGAGACCGAGAGCGAGAGGAGCAGAGCAGACGGGTGGTAACAGGAGACAAACGAGACTGTTCCTAGGGTTAGGGTTTTGTGTTAACTGAATCACACTCACTATTCCTCAGCGCGATGGGCCTTCTTCTCCGTAGAAGCAGAAGCAAAGGGAAACATTATAATGTCCTCTTCTTCTCCACATCCAACTCCAAGTCTCCCTTCAATTCCTTTTTCAGAGAAAATCTCAAAGAATCAGCTCCTTCTTCCTCAAACCCTAAGACCACCGACGGGATCCTAAAGAACCTGTACGAGTTCCGCGCCCGGACCACCGCGCCTCCGCCGCAGCCGACAATCTCGTTCCATGACCTCTACCGCAAACGGACGCAGACTCCGCCCGAATCGGGAGCAGGAGCGCACTCCATCAACATCAGCTCCATTCGCAAGAGCCTGCAAAACATCAAGGCCGCCGGGACCCCTACCTCTCCTCTGCCGAGGCCGCCTCCCTCCGACACCTTACTGAAGGACATTAAGGTACAAGGCTCGGTTCCGCCGTCCACCACGGCATTCTTGAAGCCTTACGCGGTGGAGGAATTGGGGAAGAAATTGAGGATGCTGAGGCCGGAGGGCAGGGGACAGGCTTGGTTTTCTGTGAGTGAGTTGTGTGAGAGGTTGGCGAGGCTGAGGAAGATGGATGAGGAGCAAGCCCGTTCCAATACTCGAGATTCTGATCCTAAAGCCCTACTCCACGATGTCAAGGAAACTCTCTTTCAGATGGAACAAGATGAAATTTACAAAGCTGATAGAGCTTCACGGCAGGGACTTAGTATATTGGGCTACTTCAGTGGCACTCCCACCTCTCTCGACCCTCCTAATCTACATCTTTACTTTCATCCTGATAATATGTCCTCTGCTGAAAAGCTGAAAATTGAGCTTGCCAATGTTAGAGATGAGTTTAAAATGTCCGAGTCCGATTGCGGTTCTGCTCGCGTTCAAATTGCACAACTCACAACAAAGATTAAGCATCTATCGGGAGTGCTACACAAGAAGGATGTTCATTCTCGTAAAGGTTTGCTAGCAATGGTTCAGAGGAGAAAAAGATTACTGAAATACCTTAGAAGAACTGATTGGGATTCCTATTGTTTTGTTATCTCCAAGCTGGGTCTCCGTGATAATCCTGATCATAGCTATAAAACAGCCAGTTGA 1248 0.4864 MGLLLRRSRSKGKHYNVLFFSTSNSKSPFNSFFRENLKESAPSSSNPKTTDGILKNLYEFRARTTAPPPQPTISFHDLYRKRTQTPPESGAGAHSINISSIRKSLQNIKAAGTPTSPLPRPPPSDTLLKDIKVQGSVPPSTTAFLKPYAVEELGKKLRMLRPEGRGQAWFSVSELCERLARLRKMDEEQARSNTRDSDPKALLHDVKETLFQMEQDEIYKADRASRQGLSILGYFSGTPTSLDPPNLHLYFHPDNMSSAEKLKIELANVRDEFKMSESDCGSARVQIAQLTTKIKHLSGVLHKKDVHSRKGLLAMVQRRKRLLKYLRRTDWDSYCFVISKLGLRDNPDHSYKTAS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00417 355 NCBIfam 30S ribosomal protein S15 267 344 IPR005290 GO:0003735|GO:0005840|GO:0006412
Pste6g00417 355 SUPERFAMILY S15/NS1 RNA-binding domain 266 345 IPR009068 -
Pste6g00417 355 PANTHER S15/NS1, RNA-BINDING PROTEIN 28 350 - -
Pste6g00417 355 SMART Ribosomal_S15_2 266 344 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pste6g00417 355 Gene3D - 311 346 - -
Pste6g00417 355 Hamap 30S ribosomal protein S15 [rpsO]. 256 345 IPR005290 GO:0003735|GO:0005840|GO:0006412
Pste6g00417 355 Pfam Ribosomal protein S15 269 344 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pste6g00417 355 Gene3D - 262 309 - -
Pste6g00417 355 Coils Coil 259 279 - -
Pste6g00417 355 CDD Ribosomal_S15p_S13e 268 342 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00417 Pste-Chr6 1470020 1473200 Dispersed