Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00409 GAAAAAATACCTTTGGACCAAGTGTTTGAACAATTGAATTGTTCGAAGGAAGGTCTCACAAACGAGGAAGGCCAAAAGAGGTTGCAACTTTTTGGGCCCAACAAGTTAGAAGAAAAGAAGGAAAGTAAGTTTCTGAAATTCCTGGGGTTTATGTGGAATCCTCTGTCGTGGGTCATGGAAGCTGCTGCTATTATGGCAATTGCATTGGCCAATGGAGGGGGCAAGCCACCAGATTGGCAGGACTTTGTTGGAATAATGGTATTGCTTGTTATCAACTCCACAATTAGTTTTATAGAAGAAAACAATGCTGGCAATGCTGCTGCGGCACTTATGGCAGGTCTTGCTCCCAAAACAAAGCAAGGAGAGCTTGAGGCTGTCGTAATTGCTACTGGGGTACACACCTTTTTTGGTAAGGCTGCTCACTTGGTGGACAGCACCAACCAAGAAGGTCACTTTCAGAAGGCCAGAGAAGGCATTCAAGAGGTGCATTTCTTACCCTTCAATCCAGTGGACAAGCGTACGGCCATAACATACATAGACATCAGTAGTGGCAAATGGTACCGTGCAAGCAAAGGAGCACCAGAACAGATTATCGATTTATGCAATGTCCGAGAAGATGTGAAGAAGAGAGCTCATAGCATTATCGGAAAATTTGCTGATCGGGGTCTTCGTTCCCTTGCTGTTGCCAAGCAAGAAGTTCCAGAGAAGAGCAAGGATAGTCCAGGAGGAGCATGGCAATTTGTGGGTCTCTTGCCTCTCTTTGACCCACCTAGGCATGACAGTGCGGAGACCATTCGTCGTGCTCTCCATCTTGGAGTTAACGTTAAGATGATTACAGGTGATCAACTTGCTATTGGAAAGGAGACCGCTCGCAGGCTTGGCATGGGAAGTAACATGTACCCTTCTTCCTCCCTTCTTGGCGATAACAAGGATCAGTCTATGGCTGCACTTCCAGTTGAAGAACTTATTGAACAGGCTGATGGCTTTGCTGGTGTCTTTCCTGAGCATAAATATGAGATTGTGAAGATACTCCAAGAGAGAAAACACATATGTGGAATGACTGGAGATGGTGTAAATGATGCTCCTGCTCTAAAAAAGGCAGATATTGGGATTGCAGTGGCTGATGCAACTGATGCAGCTCGAGGCGCATCTGATATAGTCCTCACAGAGCCTGGTCTGAGTGTGATTGTGAGTGCAGTTTTGACAAGCAGGGCCATTTTCCAGAGAATGAAGAACTACACTATTTATGCCGTTTCCATCACAATCCGAATTGTGTTGGGCTTTATGTTGATAGCTCTTATTTGGGAATTTGATTTCTCACCTTTTATGGTTTTGATTATTGCTATACTAAATGATGGAACAATTATGACCATTTCTAAGGACAGAGTGAAGCCATCACCTCTTCCAGATTCATGGAAGTTGAAGGAGATTTTTGCCACAGGCATAGTGCTTGGTACCTACCTTGCTCTAATGACTGTGGTCTTCTTCTATGCTGCTCACGGTACTGATTTCTTTACGGAAAAATTTGGTGTGAGATCTATCAGGTTTAACGAGGATGAGCTGACAGCTGCTGTTTACCTTCAAGTAAGTATTGTAAGTCAGGCACTTATCTTTGTTACTCGGTCAAGGAGCTGGTCTTATGTTGAGCGCCCTGGTCTCTTGCTTGTCACAGCCTTTATAATAGCACAGCTGATTGCCACAATCATAGCTGTCTACGCGGACTGGAGCTTTGCAAGGATGAAAGGAATTGGGTGGGGCTGGGCTGGTGTTATTTGGCTTTACAGTATCATTTTCTACATCCCATTGGATGTTCTGAAGTTCATAATTCGATATGTTTTGAGTGGCAAGGCATGGAGTAATATTACCGAGAACAAGACTGCTTTCACAACAAAGAAGGATTATGGAAGGGAAGAGCGAGAAGCACAATGGGCTACAGCTCAACGCACGCTCCATGGGCTGAATCCTCCCCAAGCAGAACAAATATTTAACGAGAGGAACAACTACCGCGAATTGTCTGAAATCGCAGATCAGGCTAGGAAACGAGCTGAAGTTGCAAGATTGCGGGAGCTTCACACATTGAAGGGACATGTGGAGTCTGTCGTCAAACTCAAGGGATTGGACATTGACACAATTCAGCAGCATTACACTGTTTGAGACTTTTAGTGAAGCATGTCCTCTAGGAAAAGTTAAAGAGCATCAACC 2202 0.446 EKIPLDQVFEQLNCSKEGLTNEEGQKRLQLFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIMVLLVINSTISFIEENNAGNAAAALMAGLAPKTKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKAREGIQEVHFLPFNPVDKRTAITYIDISSGKWYRASKGAPEQIIDLCNVREDVKKRAHSIIGKFADRGLRSLAVAKQEVPEKSKDSPGGAWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETARRLGMGSNMYPSSSLLGDNKDQSMAALPVEELIEQADGFAGVFPEHKYEIVKILQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGTYLALMTVVFFYAAHGTDFFTEKFGVRSIRFNEDELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGLLLVTAFIIAQLIATIIAVYADWSFARMKGIGWGWAGVIWLYSIIFYIPLDVLKFIIRYVLSGKAWSNITENKTAFTTKKDYGREEREAQWATAQRTLHGLNPPQAEQIFNERNNYRELSEIADQARKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00409 717 PRINTS H+-transporting ATPase (proton pump) signature 211 229 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00409 717 PRINTS H+-transporting ATPase (proton pump) signature 354 370 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00409 717 PRINTS H+-transporting ATPase (proton pump) signature 526 547 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00409 717 PRINTS H+-transporting ATPase (proton pump) signature 326 342 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00409 717 PRINTS H+-transporting ATPase (proton pump) signature 385 410 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00409 717 Pfam haloacid dehalogenase-like hydrolase 183 368 - -
Pste6g00409 717 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 150 260 IPR023299 GO:0000166
Pste6g00409 717 Coils Coil 668 688 - -
Pste6g00409 717 FunFam Membrane H(+)-ATPase1 194 254 - -
Pste6g00409 717 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 613 IPR023298 -
Pste6g00409 717 Gene3D - 123 260 IPR023299 GO:0000166
Pste6g00409 717 FunFam ATPase 4 plasma membrane-type 340 581 - -
Pste6g00409 717 Gene3D - 50 122 - -
Pste6g00409 717 Gene3D - 354 612 - -
Pste6g00409 717 SUPERFAMILY HAD-like 246 400 IPR036412 -
Pste6g00409 717 PRINTS P-type cation-transporting ATPase superfamily signature 271 281 - -
Pste6g00409 717 PRINTS P-type cation-transporting ATPase superfamily signature 249 260 - -
Pste6g00409 717 PRINTS P-type cation-transporting ATPase superfamily signature 354 373 - -
Pste6g00409 717 PRINTS P-type cation-transporting ATPase superfamily signature 377 389 - -
Pste6g00409 717 Gene3D - 666 717 - -
Pste6g00409 717 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Pste6g00409 717 Pfam Cation transporter/ATPase, N-terminus 2 65 IPR004014 -
Pste6g00409 717 NCBIfam HAD-IC family P-type ATPase 328 440 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00409 717 FunFam Plasma membrane ATPase 247 402 - -
Pste6g00409 717 PANTHER CALCIUM-TRANSPORTING ATPASE 154 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00409 Pste-Chr6 1416597 1420996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00409 153 717 Primary Pumps ATPases AT2G18960 81.062 0.0 958