Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00386 AGGAAAGGAATCGAGAAACCAAAAACCATTAGAGGAAACCATTAGAAGAATATGGATTCTAGACAGCGTAAAAAAGCATCTATGCAGCGCAAGTTGCAACAACTTCGATCTGTTACAAATTCCAGTGCTGTGAACAAAGCCTCAATTATTGTGGATGCCACGAGATACATAGAAGAGTTGAAGCAAAAAGTGGATGGATTGAACTCAGAGATTGGAACAGCTGAATCATCAATGTCTCAACATGAATTACCCGTGGTCACCGTAGAAACCCTAGAAAGGGGTTTCCTCATTAACGTGTTTTCAGAAAGGAATTGCCCTGGTATGCTTGTGGCAATACTCGACGCCTTTGAAGAACTGGGACTTGATGTTCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTGAAGCAGTTGGAGGAGAAAGTCAAGAGAATGAAAGCATCGATGCGCAAGTGGTGAAGCAAGCAGTGCTGCAAGCAATCCAAAACATGGATTAATTGAAGGGCACATGTGCTAAGAAGAAAGTACCTCAGACGCTTTTTTTTTTTTTCTATGAATCTTTTTATTAAATATAAAATTACGTATCCAAGTGAGAGAGAGTTAAGTGTGATACTATAGTGTGCCAAAATGTAAGTACCTCAATGCTCCTTACATGTAATGTGTCTTCTTCTTTTGTAGGAAAGAATGAATGGACAGGGATCGTCCA 710 0.4 MDSRQRKKASMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSEIGTAESSMSQHELPVVTVETLERGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVLQAIQNMD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00386 149 Gene3D - 3 66 IPR036638 GO:0046983
Pste6g00386 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 66 IPR036638 GO:0046983
Pste6g00386 149 Coils Coil 1 21 - -
Pste6g00386 149 CDD ACT_UUR-ACR-like 89 145 - -
Pste6g00386 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
Pste6g00386 149 Coils Coil 33 60 - -
Pste6g00386 149 ProSiteProfiles ACT domain profile. 80 149 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00386 Pste-Chr6 1280815 1282687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00386 3 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 39.344 1.45e-06 44.7