Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste6g00374 | ATGGATCTTCAAAGGCGAGAGCCATGCCCTTCTCAAAATTTGAACATCATCACATTTGCTCATACTATTCCCTGCCAAAAACCTCCCATTGACACTCAAACAAAGAGAAATCAGATAGAAAACGAAGATCAAAAACACCCCCATGATTCAGTTCCTCGGGTTTTACTGGATCTAAGTCTCTCTAACAAGGATTCAGTTGATGATGACTCAAAGCCAGAACTCAACCTCCTCAATTCTTTCCATACTAATTTCTCTGAGAATTCATCAGAATCTAGTCAGGGAAATGAACTGGATCCCCGAGTTTTCTCATGCAATTACTGCCAACGAAAATTTTATAGTTCTCAGGCACTTGGGGGACACCAGAATGCACACAAACGTGAAAGAACTTTGGCAAGAAGAGGGTACAAAGCTGGTGCAGCAGATTTTGGACACGCATACTCCAACATGCCTTTTCTGCCTTCACATGGCTTATACAACAAAGCACTTGGAATTCAGGTTCATTCTATGATTAACAAGCCTTCTTATCAAACACTCCCTTTTGGGGTGTGCCATTCCAATGGATGGCAGAGGCAACCTTTGGATTCACAGCCAGCAATTGGGAGCTTTTGTGTAGGGGCAGAAACTGAGTCATCTTTGGCTGATAGTGTTCCAAAGTTAGGCAAGCTTTCCACAAGTCTGGTGACAGAGGGGTTTGGAGGTTACTGCTTTGGTAGCATTACTCATTTGAAGTCTAAACAAGAGAAGTTGCAGAAGCTTGACTTGTCTCTTAAGCTCTAA | 777 | 0.426 | MDLQRREPCPSQNLNIITFAHTIPCQKPPIDTQTKRNQIENEDQKHPHDSVPRVLLDLSLSNKDSVDDDSKPELNLLNSFHTNFSENSSESSQGNELDPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYKAGAADFGHAYSNMPFLPSHGLYNKALGIQVHSMINKPSYQTLPFGVCHSNGWQRQPLDSQPAIGSFCVGAETESSLADSVPKLGKLSTSLVTEGFGGYCFGSITHLKSKQEKLQKLDLSLKL | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste6g00374 | 258 | SUPERFAMILY | beta-beta-alpha zinc fingers | 99 | 129 | IPR036236 | - | |
Pste6g00374 | 258 | Gene3D | Classic Zinc Finger | 78 | 141 | - | - | |
Pste6g00374 | 258 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 104 | 124 | IPR013087 | - | |
Pste6g00374 | 258 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 102 | 129 | IPR013087 | - | |
Pste6g00374 | 258 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 1 | 258 | IPR044246 | GO:0009788 | |
Pste6g00374 | 258 | FunFam | Zinc finger protein 2 | 79 | 148 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste6g00374 | Pste-Chr6 | 1249899 | 1250675 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste6g00374 | 30 | 258 | C2H2 Transcription Factor Family | AT5G10970 | 40.816 | 1.86e-39 | 136 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pste6g00374 | None | None | None |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste6g00374 | 6 | 1249899 | 1250675 | Pste6g00374 | 6 | 1249899 | 1250675 | ECH |