Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00372 CATTCACTACCCTTTTGAGAATGGCGAGTTTTTTGAAGTTGGCATGCGTGGTTGTGGTGTGCATGGCTGTGGTGGGAGCGCACACTGCAGAAGCAATCACCTGTGGACAGGTGCAGGGTAACCTTGCACGATGCTTAGGGTTTCTGCAAAGGGGAGGAGCTGTTCCTGTTGAATGCTGTAACGGGGTTAGGAACATTCTCAACAGTGCCAGGACCACTGCTGATCGCCGTTTCGTTTGTAACTGCTTGAAGACCGCTGCCGGTTCGGTTCGTGGGCTTAACCCTTCTAACGCTCAGGCTCTTCCTGGGAAGTGTGGGCATCAACTGAAGAAGAAAACGTTTTAGACGATTGGGTGCGAGGAACTATGATGGTACAACGTGCTAAGAATAAAAAAAAAAGGAGTATGAAGTATCCGTGAATTTATTAGAGCTAGTTTTGTTCTGTGTTTTAGTCTACTTTGTGGTTACCTAATATGCTTTTAAATTGAATAATAGTGTTGTTTTTTAATTAGCTCACTGAAATATACTCCAG 531 0.4482 MASFLKLACVVVVCMAVVGAHTAEAITCGQVQGNLARCLGFLQRGGAVPVECCNGVRNILNSARTTADRRFVCNCLKTAAGSVRGLNPSNAQALPGKCGHQLKKKTF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00372 107 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Pste6g00372 107 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Pste6g00372 107 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Pste6g00372 107 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Pste6g00372 107 Pfam Protease inhibitor/seed storage/LTP family 28 102 IPR016140 -
Pste6g00372 107 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 7 103 IPR000528 GO:0006869|GO:0008289
Pste6g00372 107 SMART aai_6 28 107 IPR016140 -
Pste6g00372 107 CDD nsLTP1 26 99 - -
Pste6g00372 107 Gene3D - 25 106 IPR036312 -
Pste6g00372 107 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 103 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00372 Pste-Chr6 1247274 1248835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00372 1 105 Acyl Lipid Metabolism Gene Families AT2G38530 47.664 3.65e-25 89.7