Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00371 atgcttggaaaaggaggttttggtccagtatacaaggggcaattggaaaatggacaagaaattgctgtaaaaagactttcaaaagcatctggacaaggattagaagaattcatgaatgaagtcgtagtgatttctaaactccaacatcgcaatctagtaagacttcttggttgttgtatagaacgagatgaacaaatgttgatctatgagtttatgccaaataaaagtttggattcacttctcttcggagtagctagaggaattctttatcttcacagagactccagactaaggattatacatagagatcttaaagcaagcaacattttactggatgctggtatgaatccaaaaatatcagactttggtttggctagaattgttagaggtgatgatgatgatgaagctaacacaagaagggttgttggaacttatggttatatgtcacctgaatatgcaatggagggaattttctcagaaaagtcagatgtttatagctttggagtgcagttgctagaaattttaagcggacgacgaaacactagcttttataacaatgagcaatcacttagtcttgttggatatgtaggcatggaaactatggaatga 609 0.0 MLGKGGFGPVYKGQLENGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIERDEQMLIYEFMPNKSLDSLLFGVARGILYLHRDSRLRIIHRDLKASNILLDAGMNPKISDFGLARIVRGDDDDEANTRRVVGTYGYMSPEYAMEGIFSEKSDVYSFGVQLLEILSGRRNTSFYNNEQSLSLVGYVGMETME 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00371 202 Gene3D Transferase(Phosphotransferase) domain 1 71 200 - -
Pste6g00371 202 FunFam Uncharacterized protein 8 71 - -
Pste6g00371 202 FunFam Os07g0541700 protein 70 144 - -
Pste6g00371 202 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00371 202 Gene3D Phosphorylase Kinase; domain 1 2 70 - -
Pste6g00371 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00371 202 Pfam Protein tyrosine and serine/threonine kinase 2 190 IPR001245 GO:0004672|GO:0006468
Pste6g00371 202 SUPERFAMILY Protein kinase-like (PK-like) 1 193 IPR011009 -
Pste6g00371 202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Pste6g00371 202 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00371 Pste-Chr6 1240699 1244165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00371 1 191 Receptor kinase-like Gene Family AT4G11530 65.550 4.40e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste6g00371 Pkinase 2.8e-38 CL0016