Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00362 AAAACAATTTGAACATCAATCTCTAGGTCCACATATTTTTCTCTCTTTTTCTATTCTTTCTTGTCTTATCTATCTACCCTAATGTTAATTGGTTTCAGGGTACTAACTAGTTAGAGAGATCAGAAATATTAATTAATGGACCACGAGGAAGTCCCATCAACACCAACACCAACACCAACACCCGGTGCTCCTCTTTTTGGTCGGGACAAAAACAATGGTCTTGTTAGGAAACCTTCCTTCCTCAAAAGTTGCAAATCTTTGGGTGTTGAAGAATGGACCTTAGAAGACGGAGCCATGCCTAAAGTAGCTTGCTCTTTACCGTCCCCTTATATCCCTCTGGCCAAAAAGGTTGGAGCTGAGTTTATAGGGACCTTCATTCTGATGTTTGCCGCTATAGGCACTGCAATTGTAAACCAAAGGACAGATGGCAAAGAGACTCTAGTTGGATGTGCTGCAGCTAATGGACTTGCTGTAATGATCATAATTTTCTCAACTGGCCACATCTCCGGGGCTCATCTCAACCCCGCTGTCACCATTTCCTTCGCTGCATTGAAGCACTTCCCGTGGAAGAATGTGCCAGTGTATATTGGTACACAAATTTTGGCATCAATAAGTGCTGCATTTGCTTTGAAGGCGGTTTTTCATCCCTTCATGAGTGGTGGAGTGACGGTCCCTTCAGTGGGATATGGCCAAGCCTTTGCCATAGAGTTCATTATCAGCTTTATTCTTATGTTCGTTGTCACTGCGGTCGCAACCGACACTAGAGCTGTGGGAGAGCTCGCCGGAATCACGGTGGGAGCCACGGTCATGCTCAACATACTCATAGCCGGGGCAGCTACTGGAAGTTCAATGAACCCTGTTAGAACACTGGGTCCAGCAATTGCTGCAAATAACTACAAGGGCATATGGGTGTATATGATAGCTCCTATAGTTGGAACTCTGTGTGGGGCTGGTGCCTACACTGTTGTGAAGCTGCCTGATGAGAAAGACCCAACAACAAAACCACCTTCTGCTCCTGCTCCTGCTCCTAGTTTCAGAAGA 1041 0.4553 MDHEEVPSTPTPTPTPGAPLFGRDKNNGLVRKPSFLKSCKSLGVEEWTLEDGAMPKVACSLPSPYIPLAKKVGAEFIGTFILMFAAIGTAIVNQRTDGKETLVGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQILASISAAFALKAVFHPFMSGGVTVPSVGYGQAFAIEFIISFILMFVVTAVATDTRAVGELAGITVGATVMLNILIAGAATGSSMNPVRTLGPAIAANNYKGIWVYMIAPIVGTLCGAGAYTVVKLPDEKDPTTKPPSAPAPAPSFRR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00362 302 PANTHER AQUAPORIN NIP2-1 61 284 IPR034294 -
Pste6g00362 302 FunFam Aquaporin NIP2-1 58 289 - -
Pste6g00362 302 Pfam Major intrinsic protein 69 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 ProSitePatterns MIP family signature. 127 135 IPR022357 -
Pste6g00362 302 PRINTS Major intrinsic protein family signature 190 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 PRINTS Major intrinsic protein family signature 70 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 PRINTS Major intrinsic protein family signature 109 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 PRINTS Major intrinsic protein family signature 146 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g00362 302 Gene3D Glycerol uptake facilitator protein. 62 288 IPR023271 -
Pste6g00362 302 MobiDBLite consensus disorder prediction 281 302 - -
Pste6g00362 302 MobiDBLite consensus disorder prediction 1 23 - -
Pste6g00362 302 MobiDBLite consensus disorder prediction 287 302 - -
Pste6g00362 302 SUPERFAMILY Aquaporin-like 66 287 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00362 Pste-Chr6 1211106 1213922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00362 1 302 Major Intrinsic Protein MIP AT1G80760 71.474 3.62e-152 426