Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00359 CCATTTAATATTTTATTTCCCACTTCTCATCTGCACAACAAGAAAACATCAACTCAAGAGATGAGAACCATTTCTACTATGTGTTGCAATTTTCACTTGATTCTTCTAATTGCTCTTGCTCTTTTCCTACGGATTTCATCTCAGCATGGTTCCAAGGTAGAAGTGCTTCCTGGCTTTGAAGGCCCTCTTCCTTTTGAACTTGAAACTGGGTATGTGGGATTGGGAGAAACAGATGATGATTTGCAAGTGTTCTATTACTTTGTTAAGTCAGAGAATGACCCTCAAAAGGACCCTCTTATGCTTTGGCTCACTGGTCCATTTGCTTTCAAGGATGAAGAGTATGATGGAAACTTACCAAATTTGATCTCGAGGCCAGAATCATGGACAAAGGCATGTAGCATTATTTTTGTAGATTTGCCATTTGGAACTGGCTTCTCATATGCAAAAAATGTCACTGCTCAACGAAGTGATTCGAAATTAGTTCATCATACCCATCAATTTCTTAGAAAGTGGCTAATTGATCACCCAGAATTTCTTTCAAATGAATTTTACATGGGAGCTGATTCATATTCTGGCATTCCTGCTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAATAGGTCTTCAACCACAAATAAATCTCCAGGGATATCTGCTAGGGAATCCTGTGACAACAAGAAAAGAAGTAAATGATAGAGTCCAATATACTCATGGAATGGGACTTATTTCTGATGAACTCTATGCGAATTTTGCATTTTTTCTTGCCACTCAATGGGCCAATCATGAAAGTGCTCGCAATGGAGATCATGATGCAGTTGTTCCTTTCAATTCAACTGAAACATGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGTTTCTAGAAAACTATGTTGCTGGATACACAAGGACATACTCGAATCAAATGACTTTTGCAACTGTGAGGGGCGGAGCACATCTAACTTCTTACAATAGACCTGCGGAAAGTCTTGCCATGTTCACTAGGTGGATTGCTAATGTGCCTTTGTAACCAAACAACAATATTGATAAAAGTGGTACAATATATAATGTAGTCCCATTTCTAAATACTAAGAAATAAAGGAAGGTGCAATTACAAGATTTGAATGCTTCA 1149 0.3812 PFNILFPTSHLHNKKTSTQEMRTISTMCCNFHLILLIALALFLRISSQHGSKVEVLPGFEGPLPFELETGYVGLGETDDDLQVFYYFVKSENDPQKDPLMLWLTGPFAFKDEEYDGNLPNLISRPESWTKACSIIFVDLPFGTGFSYAKNVTAQRSDSKLVHHTHQFLRKWLIDHPEFLSNEFYMGADSYSGIPAPAIVQEISNGNEIGLQPQINLQGYLLGNPVTTRKEVNDRVQYTHGMGLISDELYANFAFFLATQWANHESARNGDHDAVVPFNSTETWIRALNYSIVEDWRPWFLENYVAGYTRTYSNQMTFATVRGGAHLTSYNRPAESLAMFTRWIANVPL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00359 348 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 267 328 IPR001563 GO:0004185|GO:0006508
Pste6g00359 348 Gene3D alpha/beta hydrolase 46 263 IPR029058 -
Pste6g00359 348 Pfam Serine carboxypeptidase 57 259 IPR001563 GO:0004185|GO:0006508
Pste6g00359 348 Pfam Serine carboxypeptidase 268 345 IPR001563 GO:0004185|GO:0006508
Pste6g00359 348 SUPERFAMILY alpha/beta-Hydrolases 56 347 IPR029058 -
Pste6g00359 348 Gene3D - 264 348 - -
Pste6g00359 348 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Pste6g00359 348 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Pste6g00359 348 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00359 Pste-Chr6 1198421 1215915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00359 44 76 Calmodulin-binding Proteins AT2G22960 63.636 9.20e-08 50.1