Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00358 TCAGCCACAGATTTAACTTCTTCAGCAACTACTACTGTGAGTGCTTCTTTTGATTATCAGTTAAGCACAGCTTTTTATGGTTTCAAGTGTCCCCTGGCACTTGCTACCATTAAGACAATAGTAAACACCGCTGTGTGGAAAGAACCTCGCATGGGTGCATCCTTACTTCGTCTTCATTTCCACGATTGCTTTGTCCAAGGATGTGATGCATCAGTGTTGTTAGACGACACAGCAACTTTCAAAGGCGAACAAGGTGCCTTCCCTAACGTTAATTCTCTAAGGGGTTTTGAAGTGATAAACAAAATAAAAGCTGCAGTTGAGATTTTGTGCCCCGGTGTTGTCTCTTGTGCTGACATCCTAGCCGTTGCTGCAAGAGATTCTGTTGTTGCTCTTGGTGGACAAGGTTGGCCAGTTCGCTTGGGCAGAAGAGATTCAACCACTGCAAGTTTAAGTGGAGCTAACTCAGATTTACCAGCTCCCTCTCTGGATCTTAATGGCCTTACCACTGCTTTTCAAAAGAAGGGTTTCACAGTAGATGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGAAGTGCGAGATGTTTAACCTTCCGATCAAGGATTTATAACGACATCGATATTGATCCCACGTACGCAAACTCAATGAGAGATAAATGTCCCAAGACTGGTGGTGATAGCTACTTAGCTCCTATAGACATTGCCACTAAAGACATTTTCGACAATGCTTACTACTGGAATTTGATGAATAAAAAGGGTCTTTTCCACTCTGATCAACAGCTCTATAGTGGCGGTTCCACCTACACCTTCAACAAAGTTAAATATTATGCTACCAACCCATCACTCTTCAAATCTGATTTTGCCAACGCCATGCTCAAGATGAGTAACCTTAGCCCATTAACCGGTACACGGGAGAGGATTAAAAGTAGAATGGAGAAACTGTGCCCTGGTGTTGTCTCTTGCGCTGATATTCTAGCTGTGGCTGCGAGAGAGTCTGTTGTTGCTCTTGATGCACCCAGTTGGAGTGTTCTCTTGGGCAGAAGAGACTCAACAACTGCAAATCTGAGTGCTATTACAACAGATTTACCCTCTGCCTATATGGATCTTCATGAACTTCTTATTACGATTTATAACGAAAGCAACATAGATCCCTCGTATGCAAGATCATTGCAAGCAAAGTGTCCCTTCGTAGGTGGTGATGACAACATAGCCCCTTTAGACCCAACCACTCCGAACCATTTTGACAAATTTGAGAAAAAGGGTATTATGCACTCTGATCAACAGTTCTATAATGGTGCTTCCACAGATTCCATAGTTGAATTTTATGCCACAAACCCTTTAGTATTTAGAAGAGATTTCCCTAAGGAAATGATTAAGATAGGCAACATTAATGCACTTACCGGCTCCAACGGGCAGATCAGAAAACAATGCAGCAAAGTCAATGAGATATATAATTGGGCAAACCTAACTACCATGATTTGTTTGTTTTTTTACCTTATTTTGATAGCTTCCGTTGATTCTGCTGATGAGTTAAGCTCAAACTTTTATAATTCCCGATGTTCCCCGGCACTTCTAGTTATTAAGTCACAAGTAATCCCCGCTGTGTGGAAAGATCCTGCCATTGGAGCAGCCTTGATTCGTCGTCAATTCTATGATTGCTTTGGATGTGATGCATCAGTGATGTTGAAAGACACAGCAAATTTCACTGGCGAACAAAGTGCGATTCCGGATGTCGATGGTACAAATGGAACAGATATCATACTTATAGAAAACATGAAAGCTAGGCTGGAGAGAATGTGTCCTGGTGTTGTCTCTTGCGCTGACATCATAACAGTGGCTGCAAGAGATTCTGTTGTTGCTCTCGGTGGACCTTATTGGAGAGTTCTCTTGGGTAGAAGAGACTCTACAACTGCAAATCTAAGTGCTGTTTCAACAGATTTTCCCACTCCCTTCATGAATCTTCCAGAACTTGTTGCTACGTTCGCGAAAAAAAATTTCACAGCAAAAGAAATGGTTGCTTTTACAGGTGCTCACACAACAGGCAAAGTCAAATGTTTATTGTTCCGAAAAAGGATTTATAACGAAAGCAATATAGATCCTTCGTATGCAAGATCATTGCAAGCACGGTGTCCCTTCGTAGGTGGTGATGATAACTTAGCTCCTTTAGACCGCACCACTCCAATCTTTTTTGACAATGCTTACTACAACAATCTACTGCAGCAAAAGGGTCTTTTGCACTCTGATCAACAACTCTACAACGGTGGTTCCACTGACCCCATAGTTGAATTTTATGCCAGAAACCCTTCACAATTTAGAATTGATTTCGTTAAAGCAATGATCAAGATGGGTAACCTTAGTCCTCTTACCGGCACCAACGGGCAGATCAGAAAGCAATGCACATTTGCAACTACAGCACTCTCATCATTGTCACCTAATTACTATGATTACTCGTGCCCTAAAGCTTTGAGCACCATCAAAAGTGTTGTGGCAGCTGCGGTGCAGAAAGAGTACCGAATGGGCGCTTCTCTGTTACGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATTCTACTAGACCCTTCACCCACAATTGATAGCGAGAAGAATGCACTTCCTAACTTTCAATCTGCAAGAGGATTTGAAGTGGTGGATGCGATCAAAGAGGCTGTGGATGAAGCGTGTGGAAAACCAGTGGTTTCTTGCGCAGACATATTGGCAGTTGCAGCTCGTGACTCTGTCGTTGCTCTAGGGGGACCAACATGGGAAGTGAAACTTGGGAGAAGAGACTCGACCACAGCAAGCCGTGAAGCGGCAAATGCAAACATTCCAGCACCATTTTTCAGCCTTTCTGAACTCATTGACAACTTCAAGAGCCATGGCCTAAACGAGAAGGACCTTGTTATTCTTTCAGGAGGCCACACAATTGGAAATGCACGTTGTGCAACTTTTAGGGACCATATCTATAATGACTCTAATATCAGTCCCCATTTTGCGAAAGAGCTTAAACACATTTGTCCAAGAAAAGGAGGTGACTTAAACCTTGCTCCTTTGGACCGCACAGCAGCCAAATTTGATTCAGCCTATTTCGGTGATTTGGTTCACAAGAAAGGGGTCCTTCACTCCGATCAGGAACTCTTCAATGGTGGTTCTACTGATTCACTGGTTAAAAGTTATAGCCACAATACCAAGGCTTTCCACAAGGACTTTGCAAAATCTATGATTAAGATGGGAAACATAAAGCCCCTCATTGGGAATAGAGGTGAAATTCGTTTGAACTGCAGGAAAAACCAAAAATTCTACAAAATCAATTTTCTTCTAGTTACAGGTGTTGCAAGTTATTCTGTTGTGACAAATGGAATAGAAATTGAATCTAATCCAAATAATTTAAAAGGGATGTGGAATGAACTTGAGGTGTATCATTCACATACTATCAATGCTGTTGTACTTCGAGTTGAAGAGGACAAAATTTTTCAGTTGTCGCAAGTC 3498 0.4205 SATDLTSSATTTVSASFDYQLSTAFYGFKCPLALATIKTIVNTAVWKEPRMGASLLRLHFHDCFVQGCDASVLLDDTATFKGEQGAFPNVNSLRGFEVINKIKAAVEILCPGVVSCADILAVAARDSVVALGGQGWPVRLGRRDSTTASLSGANSDLPAPSLDLNGLTTAFQKKGFTVDEMVALSGAHTIGSARCLTFRSRIYNDIDIDPTYANSMRDKCPKTGGDSYLAPIDIATKDIFDNAYYWNLMNKKGLFHSDQQLYSGGSTYTFNKVKYYATNPSLFKSDFANAMLKMSNLSPLTGTRERIKSRMEKLCPGVVSCADILAVAARESVVALDAPSWSVLLGRRDSTTANLSAITTDLPSAYMDLHELLITIYNESNIDPSYARSLQAKCPFVGGDDNIAPLDPTTPNHFDKFEKKGIMHSDQQFYNGASTDSIVEFYATNPLVFRRDFPKEMIKIGNINALTGSNGQIRKQCSKVNEIYNWANLTTMICLFFYLILIASVDSADELSSNFYNSRCSPALLVIKSQVIPAVWKDPAIGAALIRRQFYDCFGCDASVMLKDTANFTGEQSAIPDVDGTNGTDIILIENMKARLERMCPGVVSCADIITVAARDSVVALGGPYWRVLLGRRDSTTANLSAVSTDFPTPFMNLPELVATFAKKNFTAKEMVAFTGAHTTGKVKCLLFRKRIYNESNIDPSYARSLQARCPFVGGDDNLAPLDRTTPIFFDNAYYNNLLQQKGLLHSDQQLYNGGSTDPIVEFYARNPSQFRIDFVKAMIKMGNLSPLTGTNGQIRKQCTFATTALSSLSPNYYDYSCPKALSTIKSVVAAAVQKEYRMGASLLRLHFHDCFVNGCDGSILLDPSPTIDSEKNALPNFQSARGFEVVDAIKEAVDEACGKPVVSCADILAVAARDSVVALGGPTWEVKLGRRDSTTASREAANANIPAPFFSLSELIDNFKSHGLNEKDLVILSGGHTIGNARCATFRDHIYNDSNISPHFAKELKHICPRKGGDLNLAPLDRTAAKFDSAYFGDLVHKKGVLHSDQELFNGGSTDSLVKSYSHNTKAFHKDFAKSMIKMGNIKPLIGNRGEIRLNCRKNQKFYKINFLLVTGVASYSVVTNGIEIESNPNNLKGMWNELEVYHSHTINAVVLRVEEDKIFQLSQV 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00358 1166 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Pste6g00358 1166 Gene3D - 514 799 - -
Pste6g00358 1166 Gene3D - 812 1098 - -
Pste6g00358 1166 ProSitePatterns Peroxidases proximal heme-ligand signature. 969 979 IPR019793 -
Pste6g00358 1166 CDD secretory_peroxidase 510 801 IPR033905 GO:0004601|GO:0042744
Pste6g00358 1166 FunFam Peroxidase 158 294 - -
Pste6g00358 1166 ProSiteProfiles Plant heme peroxidase family profile. 808 1101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 FunFam Peroxidase 648 782 - -
Pste6g00358 1166 Gene3D Peroxidase, domain 2 648 782 - -
Pste6g00358 1166 Gene3D Peroxidase, domain 2 158 294 - -
Pste6g00358 1166 Gene3D Peroxidase, domain 2 947 1080 - -
Pste6g00358 1166 SUPERFAMILY Heme-dependent peroxidases 20 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 Gene3D - 25 305 - -
Pste6g00358 1166 CDD secretory_peroxidase 20 303 IPR033905 GO:0004601|GO:0042744
Pste6g00358 1166 Gene3D - 306 373 - -
Pste6g00358 1166 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 Gene3D Peroxidase, domain 2 377 491 - -
Pste6g00358 1166 PRINTS Haem peroxidase superfamily signature 840 854 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Haem peroxidase superfamily signature 903 920 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Haem peroxidase superfamily signature 969 984 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Haem peroxidase superfamily signature 921 933 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PRINTS Haem peroxidase superfamily signature 1021 1036 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Pste6g00358 1166 SUPERFAMILY Heme-dependent peroxidases 510 801 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 PANTHER PEROXIDASE 72-RELATED 376 480 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 ProSiteProfiles Plant heme peroxidase family profile. 20 481 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 Pfam Peroxidase 529 767 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 Pfam Peroxidase 40 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 Pfam Peroxidase 826 1064 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 Pfam Peroxidase 303 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 FunFam Peroxidase 947 1080 - -
Pste6g00358 1166 SUPERFAMILY Heme-dependent peroxidases 809 1099 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 ProSitePatterns Peroxidases active site signature. 840 851 IPR019794 GO:0004601
Pste6g00358 1166 FunFam Peroxidase 812 952 - -
Pste6g00358 1166 CDD secretory_peroxidase 809 1099 IPR033905 GO:0004601|GO:0042744
Pste6g00358 1166 FunFam Peroxidase 24 167 - -
Pste6g00358 1166 ProSiteProfiles Plant heme peroxidase family profile. 510 803 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g00358 1166 SUPERFAMILY Heme-dependent peroxidases 305 481 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00358 Pste-Chr6 1198138 1229818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00358 510 799 Peroxidase AT5G05340 50.680 2.40e-100 319